Kerstersia gyiorum: EHF36_00595
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Entry
EHF36_00595 CDS
T05924
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kgy
Kerstersia gyiorum
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kgy03016
]
EHF36_00595 (thpR)
Enzymes [BR:
kgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EHF36_00595 (thpR)
Transfer RNA biogenesis [BR:
kgy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EHF36_00595 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF6304
Motif
Other DBs
NCBI-ProteinID:
QBR39295
LinkDB
All DBs
Position
complement(155678..156313)
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AA seq
211 aa
AA seq
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MPLPPATSAPAPLPEVDAALAWRRCFLALAPDAPTRAALVQLRLPDAVQPVAPADLHLTL
AFLGAITPAQGQALIQALPRLARSLPPLLGLGRASWPQPAAPRVAVARYEYPPVLQALLA
DTHALLRNLGLPVEARPFQPHITLGRYRRRAVAQTDGSAVNIALPAARFTALALYTSLHA
GTVRTPRTSGAQAEDHTGATPHYRIVAQQPI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgccccctgccaccagtgcgccagcccctctgccggaagttgatgcagccttg
gcctggcgccgttgtttcctcgcgctggcacccgatgcccccacccgcgccgcgctggtg
cagctccgcctgcctgacgccgtccagcccgtcgcccccgccgacctgcacctgaccctg
gctttcctgggcgcaatcacgccggcccaggggcaggcgctgatacaggccttgccacga
ctggcacgcagcctgccgcccctgctcgggctgggccgtgccagctggcctcagcctgcg
gcccccagggtagcagtggcacgctatgaatatccgcccgtgctgcaggccttgctggca
gatacgcatgcactgttgcgcaatctcggcctgcccgtcgaagcccggcccttccagccg
cacatcacgctgggacgctaccgccggcgagccgtcgcccaaacggatggctcagccgtc
aacatcgccctgccagccgcccgcttcactgcgctggcgttatacaccagcctgcatgcc
ggtaccgtacgaaccccgaggacctcaggcgcgcaggcagaggaccacaccggagcaaca
ccgcattaccggatcgtggcgcagcagccgatataa
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