Kerstersia gyiorum: EHF36_00935
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Entry
EHF36_00935 CDS
T05924
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kgy
Kerstersia gyiorum
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kgy03016
]
EHF36_00935
Enzymes [BR:
kgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EHF36_00935
Transfer RNA biogenesis [BR:
kgy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EHF36_00935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Rng_hyd_C
Motif
Other DBs
NCBI-ProteinID:
QBR39354
LinkDB
All DBs
Position
complement(227415..229307)
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AA seq
630 aa
AA seq
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MYLFYEEDGGFKIGHILAETDASLQVESESGKRSKIKRTSALFTFDTKDASNFLTQAQAQ
AEDIDLDFLWECSSQEDFEAAEFAADYYGHAPSALEKAALILRLHSAPIYFHRRGKGRYR
AAPADILAAAKAAQEKKRLQAEQQQQWVDEMTAGRLPAPIAEAAEMLLIRPDKNSMAWKA
MDAACQQLQKSPERLLLDLGAWPSPLALHKARFLAANFPRGTGFGDITVPDLGADLPLAD
AQAYSIDDITTTEIDDALSVQRLDDGWLRVGVHVAVPGLAVTRDSELDKHARTRLSTVYT
PGEKIPMQPEVLISRFSLDAGKPVPALSLYVEAYPATGEIRHTETRLERVQVRENLRHNQ
MDAIYSEEALAGPADAHPHLDWMQPLWQLALSLSARRDEVRGKPENNNRVEYSFYLDGNP
DDPDATVRIEPRRRNAPLDRLVAEYMILANTLWGELLARTGLPGIYRSQQAGRTRMSTHA
LPHEAIGVPQYAWCTSPLRRYVDLVNQWQLIAAAQHGISAPLVAPFKPRDADLFAIIGAF
EAQYATWHDHQDAMERYWCLRWFQQQGLKEVTAHVLREDLVRFACAPFVTRVAGMPELER
GTPVRLELMGCDELALTLDCRYLGVIAENE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgttctacgaagaagacggcggtttcaagatcggccatatccttgctgaaacc
gacgccagcctgcaagtggagtcggaaagcggcaagcgcagcaaaatcaagcgcaccagt
gcgctctttacctttgataccaaggacgcttccaatttcctgacgcaagcccaggcccag
gccgaagacatcgacctcgatttcctttgggaatgcagcagccaggaagatttcgaggct
gccgagtttgcggccgattactacggccatgccccttccgcgctggaaaaagctgccctg
atcctgcgcctgcacagcgcccccatctatttccaccgccgtggcaaaggacgctaccgc
gccgcgccggcagacattcttgcggccgccaaggcagcccaggagaaaaagcgcctgcag
gccgaacagcagcagcaatgggtcgatgaaatgacggcaggccgcctgcctgcccccatt
gccgaagccgccgaaatgctgctgatccgccccgacaagaacagcatggcctggaaggcc
atggacgccgcctgccagcaactgcagaaaagccccgagcgcctgctgctggacctgggc
gcctggcccagcccgctggcgctgcacaaggcccgcttcctggccgcgaactttccgcgt
ggcaccggctttggcgacatcacggtgcctgacctgggcgcggacctgccgctggccgac
gcccaagcctattccatcgacgacatcaccaccactgaaatcgacgatgcgctgtcggtg
cagcgtctggatgatggctggctgcgcgtaggtgtccacgtggccgtaccgggcctggct
gtcacccgcgacagcgaactggacaaacatgcgcgcacccggctgtccacggtttatacg
cctggggaaaaaattcccatgcagcccgaggtgctgatcagccgcttctcgctggatgcc
ggcaaacccgtgcccgcgctgtcgctgtatgtggaagcctatcctgccaccggcgaaata
cgccacactgaaactcgcctggagcgtgtgcaggtgcgcgaaaacctgcgccacaaccag
atggatgccatctacagcgaggaagccctggccggccccgccgatgcccacccgcatctc
gactggatgcagccgctctggcaattggcgctgtccttgtccgcccgccgcgatgaagtg
cgcggcaagccggaaaacaataaccgggtcgaatacagcttctatctggatggcaacccg
gacgaccccgacgccaccgttcgcatcgagccgcgccgccgcaatgccccgctggaccgg
ctggtggccgaatacatgatcctggccaatacgctctggggcgaattgctggcccgcacc
ggtctgcctggcatctatcgctcgcagcaggcgggccgtacccgcatgagcactcacgcc
ctgccgcacgaggccatcggcgtgccgcaatacgcctggtgcacgtcgccgctacggcgt
tatgtcgatctggtcaaccagtggcaactgatcgccgctgcccaacatggcatctcggcg
ccgctggtggcgcccttcaagccacgcgacgccgacctgttcgcgatcatcggcgccttc
gaggcgcaatacgcaacctggcacgaccaccaggatgccatggagcgctactggtgcctg
cgctggttccagcagcagggcctgaaggaagtgacggcgcacgtcctgcgcgaggatctc
gtgcgcttcgcctgcgccccctttgtcacccgcgtggccggcatgccggagctggaacgc
ggcacgccggtcaggctggaattgatgggctgtgacgaactcgcgctgacactggactgc
cgctacctgggcgtcatcgccgaaaacgagtaa
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