Kerstersia gyiorum: EHF36_03710
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Entry
EHF36_03710 CDS
T05924
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kgy
Kerstersia gyiorum
Pathway
kgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF36_03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kgy03019
]
EHF36_03710
Enzymes [BR:
kgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHF36_03710
Messenger RNA biogenesis [BR:
kgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHF36_03710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QBR39838
LinkDB
All DBs
Position
854134..855594
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AA seq
486 aa
AA seq
DB search
MTQTQTPSVPEDDTSTQTFADFGLHPDLLRAVADTGYLTPTPIQAQAIPQVLSGRDVMGA
AQTGTGKTAAFTLPILHRLMPLATHSASPARHPVRALMLAPTRELADQVAENVRRYSQHT
PLRSTVVFGGVDIGPQKEALRRGCEVLIATPGRLLDHVEQKTVNLSQVQLLVLDEADRML
DMGFLPDLDRIIKLLPTQRQTLLFSATFSNEIRKLGRTFLQNPVEIEVAGRNATADTVTQ
IAYAIRSEDKRAAVVHLVKSRNLRQVIVFSNTKIGTARLARELARDGVRAESIHGDKSQA
DRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGAS
GEAISFYAAGDERLLQDVEKLIRRPVPRGELALPAASRSRSRVPGQSSSHSGHSSHSARP
GRSSGAYGVSAAPVDEFFVKPYEPATPTAPRSEGSKPAEAEHSAGHVPAKARNVGVLLGG
SGNPRR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacacagactccctccgtaccggaggacgatacatccacgcagactttcgca
gatttcggcttgcatcccgatcttttgcgggccgtggccgataccggctatctcacgccc
acgcctatccaggcccaggccattccgcaggtgctcagcggccgtgacgtgatgggagcg
gcacagacgggcacaggcaagacggcggcgttcacgctgcccattctgcaccgtctcatg
ccgctggccacgcacagcgcatcgccggcgcgccatccggtgcgcgccctgatgctggcg
ccgacccgcgagctggccgaccaggtggcggaaaatgtgcggcgctacagccagcacacg
cccttgcgctccaccgtggtgttcggcggggtcgatatcggcccgcagaaggaagcgctg
cggcgtggctgcgaagtgctgatcgcgacgcccgggcgcctgctggatcacgtcgaacag
aaaaccgtgaacctgtcgcaggttcagctgctggtgctggacgaagccgatcgcatgctg
gacatgggcttcctgcccgacctggatcgcatcatcaagctcttgccgacacaacgccag
acgctgttgttctcggccaccttcagtaatgaaatccgcaagctgggccgcactttcctg
cagaacccggtggaaatcgaagtggctggccgcaatgccaccgccgacaccgtgacgcag
attgcctacgcgatccgcagcgaggacaagcgggcagccgtggtccatctggtgaagtcg
cgcaatctgcgtcaggtcatcgtgttttccaacacgaagatcggcacggcccggctggcg
cgtgaactggctcgtgatggcgtgcgggcggaatccattcacggcgataaaagccaggcc
gaccgcatgaaggcgctggaggcgttcaaggcgggcgagctggaagtgctggtggcgacc
gatgttgccgcgcgcggcctggatgttgccggagtgccttgcgttatcaactacgatttg
ccgtacaacgccgaagattacgtgcaccgcattggccgtaccggtcgggcaggtgcgagc
ggcgaggcgatttccttctatgcggcaggcgatgagcgcctgttgcaggatgtggaaaag
ctgatccgccgtccggtgccgcgaggtgagctggccctgccggcagccagccgcagccgt
agccgcgtacccggacagtcctcgagccattcaggtcattcgtcgcactcggcacgtcct
ggccgcagcagtggcgcatacggcgtcagcgccgcgccggttgatgagttcttcgtcaag
ccctacgagccggcgacaccgactgcgccgcgcagcgaaggcagcaaaccggccgaggcg
gaacattccgccgggcatgtgccggccaaggcccgcaatgtgggcgtgctgctgggtggt
tcgggcaatccgcgccgttga
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