Kerstersia gyiorum: EHF36_05380
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Entry
EHF36_05380 CDS
T05924
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kgy
Kerstersia gyiorum
Pathway
kgy03030
DNA replication
kgy03410
Base excision repair
kgy03420
Nucleotide excision repair
kgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EHF36_05380 (polA)
03410 Base excision repair
EHF36_05380 (polA)
03420 Nucleotide excision repair
EHF36_05380 (polA)
03440 Homologous recombination
EHF36_05380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kgy03032
]
EHF36_05380 (polA)
03400 DNA repair and recombination proteins [BR:
kgy03400
]
EHF36_05380 (polA)
Enzymes [BR:
kgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EHF36_05380 (polA)
DNA replication proteins [BR:
kgy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EHF36_05380 (polA)
DNA repair and recombination proteins [BR:
kgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EHF36_05380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHF36_05380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QBR40115
LinkDB
All DBs
Position
1235957..1238680
Genome browser
AA seq
907 aa
AA seq
DB search
MNKTLLLVDGSSYLYRAYHAMPDLRNAQGEPTGALYGVINMLRRLTQDYQADYAACIFDA
KGKTFRDDLYPEYKAQRPSMPEDLAAQIEAIHETVRALGWPVLSIGGVEADDVIGTLALQ
GEQAGMDVVVSTGDKDLAQLVTPKVTLVNTMSGEVLDPEGVKQKFGVDPDHIVDYLMLIG
DTVDNVPGVTKVGPKTAVKWLDAHGDIAGLVAAAATIKGVAGENLRQAIDQFGMTRELLT
VKTDCALDPAIASLDALKMRAPDTDKLISLYDRYGFRTWLRDLSGDQARIPEGDSRIAVE
SVAPSAVQAEYETVTTPEQLQAWVDRINQAELVALDTETTSLDAMQARLVGLSLAVRPGQ
ACYIPVAHRGPDQPEQLPLAQVLGALRPWLEDPSKAKLLHHAKYDTHVLANEGVRLLGVR
HDTMLQAYALESHRSVGMNELAQRWLGRSGVAYEDLCGKGAKQIGFDEVPLEQAAHYASE
DADFTYALHEALYPKVCEQKGLLAIYELEMLVFHVLWQVERNGVLIDAAELGRQSHEIGQ
QLVTLEQRAYEIAGQPFNLNSPKQLGEILFGRMQLPVVRKTAGGAPSTDEEVLTKLAQDY
PLPQVLLEYRGLAKLKSTYTDKLPRMINPATGRVHTNYAQAAVITGRLASSDPNLQNIPV
RTEAGRRVRRAFIAPAGRVILSADYSQIELRVMAHISGDKNLQQAFADGKDIHRATASEV
FGVPLEAVSAEQRRAAKAINFGLIYGMSAFGLAGNLGITRDAAQSYIDRYFHRYPGVARY
MDEIRQQAREQGYVETVFGRRLWLPEIRGGSGPRRQAAERAAINAPMQGTAADLIKKAMV
AVQDWLVQEKLDSLLIMQVHDELVLEVPEAELERVRQQLPGLMCDVATLAVPLVAEVGAG
QDWEHAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccttgttgctggtcgatggatcgagctatctctaccgcgcctatcacgcc
atgccggatctgcgcaacgcccagggcgagcccacaggggcattgtatggggtgatcaat
atgctgcggcggttgactcaggattatcaggcggattatgcggcttgtatattcgatgcg
aaaggaaaaaccttccgcgacgacctttatcccgagtacaaggcgcagcgtccttccatg
ccggaggacctcgccgcccagatcgaggcgattcacgaaaccgtgcgggcgctgggctgg
ccggtgctcagcatagggggcgtcgaagccgatgacgtgatcggcacgctggccttgcag
ggtgagcaggccggcatggatgtggtggtttcaactggtgacaaagacctggcgcagttg
gtgacgcccaaggtcacgctggtcaacaccatgagcggcgaagtgctggacccggaaggc
gtgaagcagaagttcggcgtcgatccagaccacatcgtcgattacctgatgctgatcggc
gataccgtcgacaacgtgccgggcgtgaccaaggtcgggcccaagacggccgtgaagtgg
ctggacgcgcatggcgacatcgccgggctggttgcagcggcggccacgatcaaaggcgtg
gccggcgagaacctgcggcaggccatcgaccagttcggcatgacccgagaactgctgacg
gtgaaaacggattgtgcgctggacccggccatcgccagcctggacgcgctgaaaatgcgt
gcgccggataccgacaagctgatctccctgtatgaccgctacgggttccgtacctggctg
cgcgacctcagcggcgaccaggcacgcattccggagggtgatagccgcattgccgttgaa
tcggtggccccgtccgccgtgcaggccgagtacgaaaccgtgacgacgcccgagcagttg
caggcctgggtggaccgcatcaaccaggcggaactggtggccctggacacggaaaccacc
tcgctggatgcgatgcaggcccggctggttggtctttcgctggcggtgcggccgggccag
gcttgctacattccggtggcgcaccgaggccctgaccaacctgaacaattgccgttggca
caggtgctcggtgctctgcgtccctggctggaagacccgtccaaggccaagctgctgcac
catgccaagtacgatacccatgtgctggccaatgaaggcgtccgcttgctgggcgtcagg
cacgacaccatgctgcaggcctatgcgctggaatcacatcgcagcgtcggcatgaacgag
ctggcgcagcgttggctgggacgttcgggcgtggcctacgaagacctgtgcggcaaaggt
gccaagcagatcggtttcgacgaggtgccgctggaacaggccgcgcactatgccagcgaa
gatgcggatttcacttacgccctgcatgaagcgctgtatccgaaggtgtgcgagcagaag
ggcctgttggccatctacgaactggaaatgctggtgttccacgtgttgtggcaggtggag
cgcaacggtgtgctgatagacgccgccgaactggggcgccagagccacgaaatcggccag
caactggtgacgctcgagcagcgggcctatgaaattgccggccagccgttcaacctcaac
tcacccaagcaactgggggaaatcctgtttggccgcatgcaactgcccgtggtgcgcaag
acggcaggcggcgccccgtcgacggacgaagaagtgctgaccaagctggcgcaggactat
ccgctgccgcaagtgctgctggaataccgtggcctggccaagctgaaatccacctacacc
gacaagttgccgcgcatgatcaacccggccaccgggcgtgtgcataccaactatgcccag
gctgccgtcatcacaggcaggttggcctcgtccgaccccaacctgcagaatattcccgtg
cgtaccgaagccggacggcgggtgcggcgggcgttcatcgcgccggccgggcgcgtcatt
ctgtcggctgactattcacagatcgaattgcgcgtcatggcgcatatttctggcgacaag
aacctgcagcaggcgtttgccgacggcaaggacattcaccgtgccacggcctcggaagtg
ttcggggtgccgctcgaagcggtgtcggccgagcagcggcgcgccgccaaggcgatcaat
tttggcctgatctatggcatgagcgccttcgggctggcgggcaacctgggtattacccgc
gacgccgcgcaatcgtatatcgaccgctatttccatcgctatcccggtgtcgcccgctac
atggacgaaatccgccagcaggcgcgtgaacagggttatgtggaaacagtgttcggccgc
cgtctttggctgccggaaattcgtggcggctctggtccacgtcgtcaggctgccgaacgg
gcggccatcaatgcgcccatgcaaggcactgcggcagacctgatcaagaaggcgatggtt
gcggtacaggattggctggttcaggaaaagctcgacagcctgctgatcatgcaggtgcat
gacgaactggtgctggaagtgcctgaggccgaactggagcgggtgcgccagcaattgccg
ggcctgatgtgcgatgtggcgacgctggccgtgccgctggtggccgaagtgggcgccggg
caggattgggaacacgcgcactga
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