Kerstersia gyiorum: EHF36_05820
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Entry
EHF36_05820 CDS
T05924
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
kgy
Kerstersia gyiorum
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kgy03000
]
EHF36_05820
Transcription factors [BR:
kgy03000
]
Prokaryotic type
Helix-turn-helix
Other families
EHF36_05820
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
HTH_29
HTH_30
AAA_5
HTH_23
HTH_17
Mg_chelatase
Phage_NinH
HTH_28
HTH_IclR
HTH_7
AAA_16
HTH_3
HTH_psq
HTH_Tnp_ISL3
HTH_22
HTH_38
HTH_1
HTH_31
NUMOD1
MerR
PAS_8
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
QBR42292
LinkDB
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Position
complement(1331847..1333529)
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AA seq
560 aa
AA seq
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MGVLDISGAASQLHDYALGLASLCSRLITNRMMQQSLAGRELLVFQRQPSLLESTERAML
LLDDGHIVGANDLALTLLRASWQDLLDQPAQQWVGDWRQLGQDAAELRSPLGERFYACLF
RTGKRVASTLPAAGNAAHNAGSRSDSSQYKPAPTEARTTYGQDAALSSTESTSAEREQMP
TPAAPAAKEERAVTPRRHPALSADLALDPQLVSRFDAVRRAFDGGLGVFLHGETGAGKEI
YARRLHAASRWRDGPFVAVNCGALPESLIEAELFGYEAGAFTGARRNGARGRLREADGGV
LFLDEIGDMPLSLQTRLLRALQERAVQPLGSDRLVPVEFGLISATHRDIGTLVQSEQFRN
DLFYRLHDLRVNLPPLRERPDLRSYLCSALRATAGDAMPLTLDDSALDRLSAHAWPGNYR
ELHAFLRTLSVMSAPGSVIRAEDVSAFLQSTVLPASPATTGPGATPSAPPHAAAGFNPSP
VGGPATTDKVDVPATAAASHVQATGASGLRQATITMIEQALAACSGNVTQAARRLGIHRS
TIYRYLERHPRATLRPGFAR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctggacatttccggcgccgcatcgcaattgcatgactacgcactggggctg
gcctcgctgtgctcgcgtctcatcaccaaccgcatgatgcagcaaagcctggccggccgc
gagttgctggtattccagcgccagccttcgctgcttgaatccaccgaacgcgccatgctg
ctgctggacgacggccatatcgtcggcgccaatgacctggccctgacactgctgcgggca
tcctggcaggacctgctcgaccaaccggcgcaacagtgggtcggagactggcgccagttg
gggcaggatgccgcagaattgcgctcgccgctgggggaacgcttctacgcctgcctgttt
cgcaccggcaaacgggtggccagcaccttaccggctgctggcaacgctgcccacaatgcc
ggcagccgcagcgacagcagccagtacaagcccgcccccacggaggcgcgaacgacatac
ggccaggacgcggccttatccagcacggaaagcacatctgccgagcgggagcaaatgccg
acaccggcggcgcccgccgccaaggaagaacgagccgtcacaccgcgccgccatccggcc
ctgtctgccgacctggcgctggacccgcaattggtgtcacgtttcgatgcagtgcgccgc
gcctttgacggtggcctgggtgtattcctgcacggggaaacaggtgcgggcaaggaaatt
tatgctcgccgcctgcatgccgcgagccgctggcgcgacggcccgttcgtcgccgtgaac
tgcggcgccctgcctgaatcgctgatcgaggccgaactgttcggctacgaagccggggcc
tttactggtgcacgccgcaacggcgcccggggccggctacgggaagcggatggcggtgtc
ttgttcctggatgaaatcggcgacatgccgctgagcctgcaaacccgcctgttgcgcgcc
ctgcaggaacgcgccgtgcagcctctgggatcggaccggctggtgccggtggaattcggt
ctgatcagcgcgacccatcgcgacatcggcacactggtgcaatccgaacagttccgcaac
gaccttttctaccgcctgcacgatctgcgcgtgaacctgccgccattgcgggaacgcccg
gacttgcgcagctacctgtgcagcgcgctgcgcgccacagcgggcgacgccatgccccta
accctggatgacagcgccctggaccgactgagcgcccatgcctggcccggcaactatcgc
gaactacatgccttcctgcgtaccctgagcgtgatgagcgcgccgggcagcgtcatccgg
gccgaagatgtttctgcgttcctgcaaagcacggtcctgcctgccagccccgctacgaca
ggccctggtgcaacgccaagcgctcccccacatgccgccgccggcttcaatcccagcccg
gtcggcggtccagccacgaccgacaaagtcgacgtccctgccacggcggcagcatcccac
gtgcaggccaccggcgccagcggcctgcgccaggccaccattaccatgatcgagcaggcc
ctggcggcctgcagcggcaacgtcacccaggcggcgcgccgcctgggcatccatcgcagc
accatctaccgctacctggagcgccatccgcgcgccaccttgcggccgggcttcgcccgc
tag
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