Kerstersia gyiorum: EHF36_06395
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Entry
EHF36_06395 CDS
T05924
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
kgy
Kerstersia gyiorum
Pathway
kgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF36_06395 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kgy03019
]
EHF36_06395 (pcnB)
Enzymes [BR:
kgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EHF36_06395 (pcnB)
Messenger RNA biogenesis [BR:
kgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EHF36_06395 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QBR40302
LinkDB
All DBs
Position
complement(1461665..1463038)
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AA seq
457 aa
AA seq
DB search
MITETIKRFVSRLRRPTGPARIPVERHGIDPRHVSRNAVKVCETLRHQGYDAYIVGGAVR
DLILGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGREIIETSTFRAPSSGE
QETDEHGRILRDNVFGNQEQDAVRRDFTMNALYYDPLTQTVIDYHNGVEDLKQRVIRMIG
DPATRYREDPVRMLRAVRFAAKISGRIDDATQAPISGLAALIENVPASRLFDEMLKLLTC
GHAMDCLQQLRSAGLHKGLLPLLDVVLEQPDGKRFVTLALERTDARVRTGKTVSPSFLFA
ALLWQQVASRWHELETRGEHRIPALVQAADSVLEEQTGKLAIQRRFTADMRDIWFMQPRL
VRRPGRAVWRLVEQPRFRAACDFLQLRAAAGEIDSVDAQWWMDLANADDSLRAEMIDGLA
QLPRDTDGDAPAARKPRRRRRRPSNARPSSNPPDNAA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagaaaccatcaaacgcttcgtgagccggctgcgccgcccaaccgggccagcc
cgcatcccggtggaacgacacggcatagacccgcgccacgtctcgcgcaacgccgtcaag
gtctgcgaaacgctgcgccatcaaggctatgacgcctatatcgtgggtggtgccgtccgc
gacctgatcctcgggctggagcccaaggatttcgatgtggctaccaacgccacgcccgag
cagatccgcccgctgttccgccgcgcccgcatcatcggccgccggttccagctggtccac
gtcgtcttcggccgcgaaatcatcgaaacctcgaccttccgcgcgccgtccagcggcgaa
caggaaaccgacgagcacggccgcatcctgcgcgacaacgtgttcggcaaccaggaacag
gatgccgtgcggcgcgacttcaccatgaacgcgctgtactacgacccgctgacgcagacc
gtcatcgactaccacaatggtgtcgaagacctgaagcagcgcgtcatccgcatgatcggc
gacccggccacgcgctaccgcgaagaccccgtgcgcatgctgcgcgccgtgcgcttcgcc
gccaagatcagcggcaggatagacgacgccacccaggcgccgatctccggcctggccgca
ctgatcgagaacgtcccggcatcgcgactgttcgacgaaatgctcaaactgctgacctgc
ggccacgccatggactgcctgcagcaactgcgcagcgccggcctgcacaagggtttgctg
ccgctgctggacgtggtgctggaacagcccgacggcaagcgcttcgtgaccctggcgctg
gaacgcaccgacgctcgggtacgcaccggcaagaccgtcagccccagtttcctctttgcc
gccctgctgtggcagcaggtggcttcgcgctggcatgaactggaaacgcgcggcgaacat
cgcattccagcgctggtccaggccgcggattccgtcctggaagagcaaaccggcaagctg
gccatccagcgtcgcttcacggccgacatgcgcgacatctggttcatgcagccgcgcctg
gtacgccgtccgggccgcgccgtctggcgcctggtcgaacaaccccgcttccgcgctgcc
tgcgacttcctgcaactgcgcgctgcggccggcgagatcgacagcgtagacgcacaatgg
tggatggacctggccaacgccgatgacagcctgcgtgcggaaatgatagacggcctcgcg
caactgccgcgcgataccgacggcgatgctccagccgcgcgcaagccgcgccggcgccgc
cgccgtcccagcaatgcccgcccttccagcaatccacccgataacgccgcctag
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