Kerstersia gyiorum: EHF36_09980
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Entry
EHF36_09980 CDS
T05924
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kgy
Kerstersia gyiorum
Pathway
kgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF36_09980 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kgy03019
]
EHF36_09980 (pnp)
03016 Transfer RNA biogenesis [BR:
kgy03016
]
EHF36_09980 (pnp)
Enzymes [BR:
kgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EHF36_09980 (pnp)
Messenger RNA biogenesis [BR:
kgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EHF36_09980 (pnp)
Transfer RNA biogenesis [BR:
kgy03016
]
Prokaryotic type
tRNA degradation factors
EHF36_09980 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
OB_RRP5_4th
DUF5813
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QBR40921
LinkDB
All DBs
Position
complement(2257102..2259243)
Genome browser
AA seq
713 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVLVSIEDTVVLATVVAARKAKAGQDFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEGFYNDVQVIIHTVSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGNYVLNPTASQLKTSALDLVVA
GTENAVLMVESEAQQLSEEVMLGGVVYGHEQMQAVINAIHELVEDAGKPEWDWQAAPRNE
ALIAAVTAVAENGLKAAYSIREKQARTAQLREVYADVHAKLAEQAAQAGTAAPDTVEVEN
ILFDLEARIVRSQILSGEPRIDGRDTRTVRPISIRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMFHYNMPPFATGETGRVGVPKRREIGHGRLAKRSLVPLL
PAHEDFQYSIRVVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKDALGGSRQELSTFAPRMLQIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGSI
TISSADLDRAKEAQRRIEEITADVEVGQVYEGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQAVRVKVIEADEKGRLRLSVKAIGGIEQQGGPAAPGAAQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgaccaagtcgttccagtacggtcagcatacggtggtgctggagacg
ggcgagattgcccgccaggcctccggcgccgtgctggtgtccatcgaagataccgtcgtg
ctggcaactgttgtcgcagcgcgcaaggccaaggccggtcaggactttttcccgctgact
gtcgattacatcgagaaaacgtatgcggccggccgcatccccggcggctttttcaagcgc
gaaggcaagccttccgaaaaggaaacgctgacttcccgcctgatcgaccgtccgctgcgc
ccgctgttcccggaaggtttctacaacgacgtccaggtcatcattcatacggtttcggtc
aatcctgaaatcgacccggacatcgccgccatgatcggcgcttctgccgcgctggccatc
tctggtattccgttcaacggtccgatcggtgccgcacgcgttggttacatcgacggcaac
tatgtgctgaacccgactgccagccagctcaagacgtctgcgctggatctggtcgtggcc
ggtacggaaaacgccgtgctgatggtcgagtccgaagcacagcagctcagcgaagaagtg
atgctgggcggcgtggtctatggccacgagcaaatgcaggctgtcatcaatgccatccat
gagttggtggaagatgctggcaagccggaatgggattggcaagctgcgccgcgcaacgaa
gcgctgatcgcggccgtgactgccgtggccgaaaacggcctgaaggcggcttactccatc
cgcgaaaagcaggcgcgcacggcgcaactgcgcgaagtgtacgctgacgtgcatgccaag
ctggccgaacaggctgcacaggcagggactgctgcgcccgatacggttgaagtcgaaaac
attctgttcgacctggaagctcgtatcgtccgttcgcagatcctgagcggcgagccgcgt
atcgacggccgtgacacgcgcacggtgcgcccgatcagcatccgcctgggcgtgctgccc
cgcgcgcacggcagcgcgctgttcacccgtggtgaaacgcaggcgctggtggttgccacg
ctgggcaccaagcaggacgagcagatcatcgacgcgctgatgggcgagtaccgcgaccgc
ttcatgttccactacaacatgcctccgttcgcgaccggcgaaacgggccgcgtgggcgtg
cccaagcgtcgtgaaatcggccatggccgcctggcgaagcgttcgctggtgccgctgctg
cccgctcatgaagacttccagtacagcatccgtgtggtgtcggaaatcaccgaatccaat
ggttcctcgtcgatggcttcggtttgcggcggttcgctggccatgatggatgccggtgtg
cccgtgaaggatcacgtggctggcgtggccatgggcttgatcctggacggcggcaagttc
gccgtgctgacggacatcctgggcgacgaagatcacctgggcgatatggacttcaaggtg
gcgggtaccgaaaacggtgtgaccgcactgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtggcgctggctcaggcccgcgaaggccgcctgcatatcctgggc
aagatgaaggacgccctgggcggttcgcgccaggagctgtcgaccttcgcaccgcgcatg
ctgcagatcaagatcaatccagaaaagatccgtgacgtgatcggcaagggcggcgccacc
attcgcgcgctgaccgaagaaaccggtacgcagatcgacatctcggacgatggcagcatc
accatctccagtgccgacctggatcgcgcgaaggaagcccagcgccgcatcgaagaaatc
acggcggacgtggaagttggccaagtatatgaaggcagcgtactgcgcctgctggatttc
ggtgccatcgttcaggtgttgccgggccgcgacggcctgctgcacatttccgagatcgcg
aactatcgcatcgccaacatcaacgatgtgctgaaggttggtcaggcagtgcgtgttaag
gtgatcgaggccgacgaaaagggccgtctgcgcctgtcggtgaaggcgatcggcggcatc
gaacagcagggcggcccggccgctcctggcgctgcccagtaa
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