Kerstersia gyiorum: EHF36_10845
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Entry
EHF36_10845 CDS
T05924
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kgy
Kerstersia gyiorum
Pathway
kgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF36_10845 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kgy03021
]
EHF36_10845 (rho)
03019 Messenger RNA biogenesis [BR:
kgy03019
]
EHF36_10845 (rho)
Transcription machinery [BR:
kgy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EHF36_10845 (rho)
Messenger RNA biogenesis [BR:
kgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EHF36_10845 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
NACHT
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBR41071
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All DBs
Position
2450116..2451372
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AA seq
418 aa
AA seq
DB search
MHLNELKALHVSQLLEMAASLDIDNANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPDTSYLASPDDIYISPSQIRRFNLHTGDSIEGEVRVPKDGERYFALVKVDRVN
DQPPEVLKHRIMFENLTPLHPDSPMRLERDIKSEENLTGRILDIFAPIGKGQRALVVASP
KSGKTVMMQHIAHAITTNYPDAYMIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKRDVVIVLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIGTALIETGSRMDEVIYEEFKGTGNCEVHLERRLAEKRIYPAMNL
NKSGTRREELLIKPDLLQKIWVLRKFIHEMDDVQAMEFILDKMRKTKNNAEFFDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgaatgaactgaaggcgctgcacgtctcgcagctgctggaaatggccgcgagc
ctggacatcgacaacgccaaccggctccgcaaacaagagctgatgttcgccatcatgaag
cgccgtgccaagcaaggcgagcagatttttggcgatggcgtgctcgaagtgctgcctgac
ggtttcggcttcctgcgttcgcccgatacctcctatctggccagccccgacgacatctat
atttccccgtcccagatccggcgcttcaacctgcataccggcgactccatcgaaggcgaa
gtccgcgtgcccaaggatggcgaacgctatttcgcactggtgaaggtcgatcgtgtcaac
gatcagccgcccgaagtgctcaagcaccgcatcatgttcgagaacctgacgccgctgcac
ccggattctccgatgcgcctggaacgcgacatcaagagcgaagagaacctgacgggccgt
atcctcgacatcttcgcgcccatcggcaagggccagcgcgccctggtcgtcgccagcccg
aagtcgggcaagaccgtgatgatgcagcacattgcccatgccatcacgaccaactacccc
gacgcctacatgatcgtcctgctggtcgatgagcgccccgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtcgtggcttccacgtttgacgagcctgccacacgccacgtt
caggtcgcggaaatggtgatcgagaaagccaagcgcctggttgagatgaaacgcgatgtg
gtcatcgtgctggactccatcacgcgtctggcacgtgcctacaacaccgtggtgccgtcc
tccggcaaggtgctgaccggcggcgtggacgccaacgccctgcaacgccccaagcgcttc
ttcggtgcagcccgcaatctggaagaaggcggctcattgaccatcatcggcaccgcactg
atcgaaaccggcagccgcatggatgaagtgatctacgaagaattcaagggtaccggcaac
tgcgaagtccacctggagcgccgcctggcagagaaacgcatttacccggccatgaacctg
aacaagtcgggtacgcgccgcgaggaactgctcatcaagccggacctgctgcagaaaatc
tgggtgctgcgcaagttcatccacgaaatggacgacgtgcaggccatggagttcattctc
gacaagatgcgcaagaccaagaacaacgccgaattcttcgacatgatgaagaaataa
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