Novacetimonas hansenii: IFJ82_00340
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Entry
IFJ82_00340 CDS
T06979
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kha
Novacetimonas hansenii
Pathway
kha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IFJ82_00340 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kha03019
]
IFJ82_00340 (pnp)
03016 Transfer RNA biogenesis [BR:
kha03016
]
IFJ82_00340 (pnp)
Enzymes [BR:
kha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IFJ82_00340 (pnp)
Messenger RNA biogenesis [BR:
kha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IFJ82_00340 (pnp)
Transfer RNA biogenesis [BR:
kha03016
]
Prokaryotic type
tRNA degradation factors
IFJ82_00340 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
CCDC47
Motif
Other DBs
NCBI-ProteinID:
QOF95224
LinkDB
All DBs
Position
complement(78875..81007)
Genome browser
AA seq
710 aa
AA seq
DB search
MFDYFRTEIEWGGRPLILETGKIARQADGAVVVTYGDTVVLCTAVGAKSVKPGQDFFPLT
VNYQEKAYAAGKIPGGFFKREGRPSEAEVLNSRLIDRPIRPLFPDNFRNEVQVVATVLSH
DMENDPAIVALIGCSAALTLSGVPFFGPVGACRVGYIDGKYVLNPTIAQTKESALDLVVA
GTEEGVLMVESEAAELSEKVMLGAVTFGHEAFQDVIDAIIELAEHAAKAPWDLVEPSAEE
IKLRKKIEKLGRKAIAEAYQERVKQVRYKKVAAAKDAILAKLDPAEAEAAKPLLKELEAN
VVRSAVLETGHRIDGRDLKTIRPIVSEVGILPRAHGSALFTRGETQALVIATLGTGQDEQ
VIDALEGEYRTNFMLHYNFPPFSVGECGRMGSPGRREIGHGKLAWRAIHPLLPGKDTFPY
TMRVVSEITESNGSSSMATVCGTSLALMDAGVPLKRPVAGIAMGLIKEEEEFAVLSDILG
DEDHLGDMDFKVAGTENGITALQMDIKITSITPEIMEIALDQARGGRMHILGEMSKALTE
GRSDVSSSAPKITTISVPKEKIRDVIGQGGKVIREIVEYSGAKIDINDDGTIMIAASSDE
QAEKAIERIRGIVAEPEIGKIYNGKVVKTADFGAFVNFLGPRDGLVHISELAQGRVAKTT
DVVKQGDEVKVKVLGFDDRGKVKLSMRVVDQETGADIGEAVGAKAGRTAR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatttccgtactgagatcgagtggggcggccgtccccttatcctcgaaacg
ggcaagattgcgcgccaggctgatggcgcggttgtcgtcacctatggcgatacggtcgtg
ctgtgcaccgccgtcggcgcgaaaagcgtcaagccggggcaggatttcttcccgctgacg
gtcaactatcaggaaaaggcctatgccgcgggcaagatccccggtggcttcttcaagcgc
gaaggccgtccgtccgaggccgaagtcctcaattcacgcctgatcgaccggccgatccgt
ccgctgttccccgacaatttccgcaacgaggtgcaggttgtcgccacggtgctgagccat
gacatggaaaatgatccggcgatcgtggcgctgatcggctgttcggccgcgctgacactg
tcgggtgttccgttcttcggcccggttggcgcatgccgcgtgggttatattgatggcaag
tatgtcctgaacccgaccatcgcgcagacgaaggaaagcgcgcttgacctcgtcgtcgca
ggcaccgaggaaggtgtgctgatggtcgagtccgaggccgctgaactgagcgagaaggtc
atgctcggcgcggtgacgttcgggcacgaggcattccaggacgtgatcgacgcgatcatc
gagcttgctgaacacgcggcgaaggcaccgtgggatctggtcgagccgagtgcagaagaa
atcaagctgcgcaagaagatcgagaagctgggccgcaaggcaatcgccgaggcgtaccag
gaacgcgtcaagcaggtgcgttacaagaaggttgccgctgcgaaggacgcgatcctcgcc
aagctcgacccggcagaagccgaagccgcgaagccgctgctcaaggaactcgaagccaac
gtcgtgcgctctgccgtgttggagacggggcatcgcattgatggccgcgacctcaagaca
atccgcccgatcgtttccgaggtcggcatcctgccgcgtgcgcatggctccgccctgttc
acccgtggcgagacgcaggcccttgtcatcgcgacgcttggcaccggtcaggatgaacag
gtgatcgacgcgcttgaaggtgaataccgcaccaatttcatgctgcattacaacttcccc
ccgttctcggtcggggaatgtggtcgcatgggctcgccggggcgtcgtgaaatcggtcat
ggcaagctggcatggcgtgcgatccacccgctgctgccgggtaaggataccttcccgtac
acgatgcgcgtcgtgtccgaaatcaccgaaagcaatggttcgtcctccatggccacggtg
tgcggcacgtcgctggcgctgatggatgcgggcgttccgctgaagcgtccggtcgcgggc
atcgcgatgggcctgatcaaggaagaggaagaattcgcggtcctgtccgatatccttggt
gacgaggatcacctcggcgatatggacttcaaggttgcgggtacggaaaacggcatcacc
gccctgcagatggacatcaagatcacgtccatcacgcccgagatcatggaaatcgcgctt
gatcaggcacgcggtggccgcatgcacatccttggcgagatgtccaaggcgctgacggaa
gggcgttcggatgtgtcgtcttccgcgccgaagatcaccacgatttcggtgccgaaggaa
aagatccgcgacgtgatcgggcagggtggcaaggtcatccgcgagatcgtggaatattcg
ggtgcaaagatcgacatcaacgacgatggcacgatcatgatcgccgcgtcttctgacgaa
caggcggaaaaggcgatcgagcgtatccgcggcatcgtggccgagcccgagatcggcaag
atctataacggcaaggtggtcaagacggctgatttcggtgcgttcgtgaacttccttggt
ccgcgtgacggtcttgtccacatctccgaactggcgcaggggcgtgtcgcgaagaccacc
gatgtcgtcaagcagggtgatgaagtgaaggtgaaggtcctggggtttgatgaccgcggc
aaggtgaagttgtccatgcgggttgtcgatcaggaaaccggtgccgatatcggtgaagcg
gttggcgcaaaggccgggcgcaccgcgcgctga
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