Novacetimonas hansenii: IFJ82_02125
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Entry
IFJ82_02125 CDS
T06979
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kha
Novacetimonas hansenii
Pathway
kha03030
DNA replication
kha03410
Base excision repair
kha03420
Nucleotide excision repair
kha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IFJ82_02125 (polA)
03410 Base excision repair
IFJ82_02125 (polA)
03420 Nucleotide excision repair
IFJ82_02125 (polA)
03440 Homologous recombination
IFJ82_02125 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kha03032
]
IFJ82_02125 (polA)
03400 DNA repair and recombination proteins [BR:
kha03400
]
IFJ82_02125 (polA)
Enzymes [BR:
kha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IFJ82_02125 (polA)
DNA replication proteins [BR:
kha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IFJ82_02125 (polA)
DNA repair and recombination proteins [BR:
kha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IFJ82_02125 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IFJ82_02125 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QOF95511
LinkDB
All DBs
Position
complement(494525..497311)
Genome browser
AA seq
928 aa
AA seq
DB search
MHTDAQVRLILVDGSGFIFRAFHALPPMTSPDGTPVNAVFGFTNMLARLLREHAGTHLAV
IFDAGRHTFRNDLYDQYKAHRPEPPEDLRPQFALVRDATAAFSVPAIEEAGWEADDLIAA
YARKATDVGGTCTIISSDKDLMQLVRPGVSMMDPIKQKPIGEAEVMAKFGVAPAQVIDVQ
ALIGDPVDNVPGVPGIGPKTAAALMEEYGSLDAILAGAARMKPSKRRDNLIAHADMARLS
RQLVTLREDAPCPVSLASLACCDVDEARLGPWLEAMGFRSLLQRIGLKSMGAERRGTPFI
PPAPPPLADDAAHTAGTVPDAPYGTYDTITDADTLRAWVAQARDAGVCAVDTETDGLDPL
RAGLVGISLATGPGRACYIPLAHEGDLMDSASVTQMDAAIALECLSDLLVDPSVLKVFQN
AKFDLEVLVRAGAPQPTPIDDTMLISYAQFAGKHTQGMDELSRVYLGHTPIPYDEVTGTG
RNRIPFARVDIARATTYAAEDADVTLRLWHVLRPLLRPNQALALYEELERPLVAILADME
RMGIAVDAHDLRAMSVEFAGRMAMIEARIHTLAGREFNVGSPKQLGEILFDEMGLTGGKR
MKSGAWGTDSSVLQDLADKGHDLPAEVLAWRQLAKLKSTYADALVNQVDPATGRVHTSFQ
MAVTTTGRLSSNDPNLQNIPVRTEEGGRIRRAFIAPAGQVLLSADYSQIELRLLAHVADI
PALKEAFALGQDIHARTASEVFGIPIEGMDPLTRRRAKAINFGIIYGISAFGLSRQLGIA
PGEAKGYIDAYFTRYPGIRDYMERTREEARANGYVVTPFGRRCWVPEINGRNAARRNYAE
RQAINAPLQGGAADIIKRAMVQIPHAMRDAGLDGRMLLQVHDELLFEVRHEEADRLAALV
KQVMESAATLSVPLVVETGTGTNWADAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcacactgacgcgcaggtccgcctgatccttgtggatggttccggtttcattttccgt
gccttccacgccttgccccccatgaccagcccggacggaacgcccgtcaatgcggtattc
gggttcaccaacatgctcgcacggctgctgcgcgaacatgcgggaacgcatctggcggtt
atcttcgacgcgggacgccacacgttccgcaacgacctgtatgaccagtacaaggcccat
cgccccgaaccgcccgaagacctgcgcccgcaattcgcgctggtgcgtgatgcgacggcg
gccttcagcgtacccgcgatcgaggaggcaggctgggaagccgatgacctgatcgcggcc
tatgcgcgcaaggcgacggatgtggggggcacctgcaccatcatctcctctgacaaggac
ctgatgcagctagtgcgtccgggcgtgtcgatgatggatccgatcaagcagaaacccatt
ggcgaggccgaggtgatggccaagttcggcgtcgccccggcacaggtcatcgacgtgcag
gccctgattggcgacccggtggacaacgtgcccggcgtgccgggaatcgggccgaagacg
gcggccgcgctgatggaggaatatggctcgctcgacgccatccttgcgggtgccgcgcgg
atgaagccgtcaaaacggcgtgacaacctgatcgcgcacgcggacatggcgcgcctgtca
cgccagcttgtcaccctgcgcgaggacgcgccctgccccgtgtcgctcgcctccctcgcc
tgctgcgacgtggacgaggcgcgactcggcccctggctggaggcgatgggctttcgctcc
cttctgcagcgcatcggcctgaaatccatgggggcggagcggcgcggaaccccgttcatt
ccccccgcccccccgccgcttgcggatgatgccgcccacaccgcaggcaccgtgcccgat
gcgccgtacgggacgtatgacaccatcaccgacgccgacacgctgcgcgcatgggtggca
caggcgcgggacgcgggcgtatgtgcggtggatacggaaaccgatgggctcgacccgctg
cgcgcgggactggtggggatttcgctggcgaccgggccgggccgcgcgtgctacatcccg
ctggcgcatgaaggcgacctgatggacagcgcctctgtaacgcagatggatgccgccatc
gcgctggaatgcctgtcggacctgctggtggacccgtcggtgctcaaggtgttccagaac
gccaagttcgaccttgaggtactggtgcgcgcgggcgcgccacagcccacgcccatcgac
gatacgatgctgatttcctatgcgcagttcgcgggcaagcatacgcagggcatggacgaa
ctgtcgcgggtgtatctgggccatacgcccatcccctatgacgaggtgacgggcaccggg
cgcaaccgcattcccttcgcccgggtggacatcgcgcgcgccaccacctacgccgccgag
gatgcggacgtgacgctgcgcctgtggcatgtgctgcgcccgctgctgcgccccaaccag
gcgcttgcgctgtatgaggagctggaacgcccactggttgcgatcctggcggacatggag
cgcatgggcatcgcggtcgatgcgcacgacctgcgggccatgtcggtcgaattcgcaggg
cgcatggccatgatcgaggcacgtatccatacccttgcggggcgggagttcaatgtcggc
tcgcccaagcaactgggcgagatcctgttcgacgaaatgggcctgaccgggggcaagcgc
atgaagtccggcgcatgggggacggattcgtccgtgttgcaggaccttgcggacaagggg
catgaccttccggccgaggtgctggcatggcggcagctcgccaagctcaagagcacctat
gccgatgcgctggtcaaccaggtcgatcccgcgacggggcgggtccacacctcattccag
atggcggtgacgaccacggggcggctgtcgtcgaacgatcccaacctgcagaacatcccc
gtgcgcacagaagagggcgggcgcatccgccgcgccttcatcgcgcctgcgggacaggtt
ctgctgtcggcggattattcacagatcgaactgcggctgctggcgcatgtggcggacatt
cccgcgctgaaggaagcctttgcgctggggcaggatatccatgcccgcaccgcgtccgaa
gtgttcggcatcccgatcgaggggatggacccgctgacgcgccgtcgcgccaaggcgatc
aatttcggcatcatatacggcatcagcgcctttggcctcagccggcagcttggcatcgca
ccgggggaggcaaaaggatatatcgacgcatatttcacgcgctatcccggcatccgcgat
tatatggagcgcacgcgtgaagaggcccgcgccaacggatatgtcgtcacccccttcggg
cggcgctgctgggtgccggaaatcaacgggcgcaacgccgcacgccgcaattacgccgaa
cgccaggccatcaacgccccgctccaggggggggcggcggacatcataaaacgcgcgatg
gtgcagattcctcacgcaatgcgtgatgcggggcttgacggacgcatgctgcttcaggtc
catgacgaacttctgttcgaggtgcggcacgaagaggcggaccgtctcgccgcccttgta
aagcaggtcatggaatccgcagcgaccctttccgtgccgctggtggtggaaaccgggacc
ggaacgaattgggcggacgcacactga
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