Novacetimonas hansenii: IFJ82_03645
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Entry
IFJ82_03645 CDS
T06979
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
kha
Novacetimonas hansenii
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kha03400
]
IFJ82_03645 (addB)
Enzymes [BR:
kha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFJ82_03645 (addB)
DNA repair and recombination proteins [BR:
kha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IFJ82_03645 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QOF95756
LinkDB
All DBs
Position
846633..849734
Genome browser
AA seq
1033 aa
AA seq
DB search
MFPADGAPPGAPNARIVTVAHHVPFLDQLAARWMAEVGDDPQRTGAGLILLPSRRAARAL
TEAFLRRADGRALLLPRIAPIAALDEAALALSGEAALDLPPAVEPMRRLATLTRLVLQAG
EAFGDVRTVDQAWPLARALADLMDEAEWAECDLRERLPDAADGDFAQHWHLTLKFLSIVT
GVWPAWLEEQGVMNPVARQVALLHAQAAHWRESPPPAGHRLWAAGFSDAVPSTVAVLRTV
LDLPGGRLVLTPVDMDMDARTWSDLPPGHPQAGTARMLADLGVGRDGLEVWDELPAVSMA
GSMAGGMVGAPPGRAALLSHALLPASALGQWLDPAPAPQLDGLSVLHTADQQEEAAAIAL
ILRQAIEQPGRPAALVTPDRALAGRVATELARWGVVADDSAGEGLATTPQATFLRLIVQA
VDGGLSPVALLSLLKHPLAACGLSPGNCRASARLLERAILRGPAPPPGIAGLRAALSRAT
QDEHGALADAPDAPQELSAFLDRLERALDPLLSRASGMAEVVDLLSALVEVAQALATTDA
HADTEGGGDGASRLWSGEEGNALGAHLAELLTWCDVLPAQRVGALDGLLASSLAGVTVHG
HRALRGREQAAVHPRVFIWGLLEARLQTAGTIVLGGLVETVWPPATDPGPWMSRPMRTRI
CLPSPECAIGQAAHDFIACACAAPEVVLSVPGRRQGAPAVAARWLVRLDAYLSGRGQALA
THPALSWLERLDRPSGAPAPVAPPRPCPPVALRPRSLSVTEIEIWMRDPYAIYARRILGL
KPLAGLEEMADAADYGEIVHEALDRWFTRYPDHWPRDGEEEMARVFEQVLHDARLRPALA
AWWAPRLGRIARWCAMTEEARRAGGASCSVMTELSGKMELSGFSFGTFVLRGRADRIDRD
GEGGLSLFDYKTGTLPTRASVLAGWQSQLVLEAAMIEAGGFAPTVAGRVTELVYWRLTGG
HVPARVLDIARGEELSDLIAKCRAGLYKRVADYDNPHMPYLSHPHPGEEPRFADYAHLAR
VAEWSAAREEDMA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtttccggccgacggtgccccgcccggcgcgcccaatgcccggattgtcacggtcgcc
catcatgtgcccttcctcgatcagcttgcggcgcgctggatggcggaggtgggggacgac
ccgcagcgcactggcgcgggcctgatcctgttgcccagccgccgcgccgcgcgtgccctg
acggaggcgttcttgcgccgggccgatggccgtgcgctgctgttgccacggatcgcgccc
attgcggcgctggacgaggccgcgcttgccctgtcgggggaggcggcgttggatctgccc
cccgcggtcgaaccgatgcgccgccttgcgacgctgacgcggctggtgttgcaggcgggc
gaagcatttggcgatgtgcgcacggtcgatcaggcatggccgctggcgcgcgcgcttgcc
gatctgatggacgaggcggaatgggcggaatgcgacctgcgcgaacgcctgccggatgcc
gccgatggcgattttgcgcagcactggcacctgacgctgaaattcctgtcgatcgtgacc
ggcgtgtggcccgcatggctggaggagcagggcgtgatgaaccccgtcgcccgccaggtc
gcgctgttgcatgcgcaggcggcgcattggcgcgaaagtccgccgcccgccgggcatcgg
ttatgggcggcagggttttcggatgccgtgccctccaccgtggcggtattgcgcacggtg
ctggacctgccgggcgggcggctggtgctgacaccggtggacatggatatggacgcccgc
acatggtccgacctgccgcccggtcatccacaggcgggcaccgcacgcatgttggccgac
cttggggtggggcgcgacgggctggaggtctgggacgaactgcccgccgtgagtatggcc
gggagcatggccgggggcatggtcggggcgccaccggggcgcgcggcgctgctgtcgcat
gcattgctgcccgcatcggcgctggggcaatggctggaccccgcgcccgcgccgcagctt
gacgggctgtcggtgctgcatacggcggaccagcaggaggaagccgccgccatcgccctg
atcctgcgccaggcgattgaacagcccggacggcctgccgccctggttacgccggaccgc
gcgctggcgggacgggttgcaaccgaactggcgcgctggggcgtggtggccgatgacagc
gcgggcgaggggctggcaaccacgccgcaggccacgttcctgcgcctgatcgtgcaggcc
gtcgatggcgggctgtcgccggtcgcgttgttgtccctgctcaagcatccgctggcggcg
tgcgggctttcgccggggaactgccgcgcgtcggcccggcttctggaacgtgcgatcctg
cgcggccctgccccgccaccgggtattgcgggcctgcgcgccgccctgtcgcgcgcgacg
caggacgaacatggcgccctggccgatgcgccggacgcgccgcaggaactgtccgccttc
ctcgaccggctggaacgcgcgcttgatccgctgctgtcgcgcgcgtccggcatggcggag
gtggtggacctgctatccgcactggtggaggtggcgcaggcactggccacgaccgatgcc
cacgctgataccgagggcggcggtgatggcgcgtcgcgcctgtggtcgggggaggaaggc
aacgcgctgggcgcgcatctggcggaactgctgacatggtgcgacgtgctgcccgcgcag
cgggttggcgcgctggacgggcttttggcgtcatcgctggcgggggtgacggtgcatggc
caccgtgcgttgcgtgggcgcgaacaggcggcggtgcatccgcgtgtctttatctggggc
ctgctggaggcacggctgcagacggcgggaaccatcgtcctgggcgggttggtcgaaacc
gtctggccccccgcgaccgatccgggaccgtggatgagccgccctatgcgcacgcgcatc
tgcctgccgtcgcccgaatgcgccatcgggcaggcggcgcacgatttcatcgcctgcgcc
tgcgccgcgcctgaagtcgtgctgtcggtgccgggccgcaggcagggcgcgcccgccgtc
gccgcacggtggctggtgcggcttgacgcctatctttcggggcgggggcaggcacttgcg
acacatccggcgctgtcatggctggaacgtctggaccgtccgtccggtgcgcccgccccc
gtggcccccccacgcccatgcccgcctgtcgccctgcgtccgcgcagcctgtccgtgacg
gaaatcgagatatggatgcgcgacccgtatgccatctatgcacggcgcatccttgggctg
aagccccttgcggggctggaggaaatggccgacgccgccgattacggggaaatcgtgcat
gaggcgctggaccggtggttcacgcgctatcccgaccattggccccgcgatggggaggag
gagatggcgcgggtgttcgaacaggtgttgcatgatgcgcgcctgcgcccggcgctggcg
gcatggtgggcgccacgccttggccgtatcgcgcgctggtgcgccatgacggaggaagcc
cgtcgcgccggtggtgcgtcatgttcggtcatgaccgaactgtcggggaagatggagctg
tcgggcttttcctttggcacgttcgtgctgcgtggccgtgccgaccggatcgaccgtgac
ggcgaaggggggctgagcctgtttgattacaagaccggcaccctgcccacacgtgcaagt
gtgcttgcaggatggcagtcgcagcttgtgctggaggcggcgatgatcgaggcgggcggc
tttgcccccacggtggcgggacgggtgacggaactggtgtactggcggctgacgggcggg
catgtgccggcgcgggtgctcgatatcgcacggggggaggaactgtccgacctgatcgcg
aaatgtcgtgccgggctgtataaacgggtggcggattacgataatccgcacatgccctat
ctgtcgcatccccatccgggggaggagccgcgctttgccgattacgcccatcttgcgcgt
gttgcggaatggagtgccgcgcgtgaggaggacatggcatga
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