Novacetimonas hansenii: IFJ82_06570
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Entry
IFJ82_06570 CDS
T06979
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kha
Novacetimonas hansenii
Pathway
kha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IFJ82_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kha03400
]
IFJ82_06570
Enzymes [BR:
kha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IFJ82_06570
DNA repair and recombination proteins [BR:
kha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IFJ82_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QOF96230
LinkDB
All DBs
Position
complement(1491832..1493058)
Genome browser
AA seq
408 aa
AA seq
DB search
MPTVVLAHSLDFVTWRNATRTLALHGIPATDIIWRIRDPADAAMQTGITAPLHADTSPRS
TFGVPRAMMRLVQDILQAETPDRFDLAYRLVLRLATGEDPARRPADDAEILRARHIAQDV
RRETLAFRTHVATSHDPTQAIIWDAADSLVAYCNARFVTLQRSFHPWHVQMGERVMRWDG
TTLHPGTPLEGADPASFPSPALPLAEGMDIERITALPAVAEAARSCLTCAMAHHATQTVF
GEGTTTASLMFVGEQPGDQEDLAGRPFVGPAGQLFDRALHEVGIARDDVYVTNTVKHFKF
FNRNGRRIHQKAGMEEIRACAPWLHAERRMVRPRLLVMLGATAASAILQRSVVIGHERSR
PITLDDGTCGLVTVHPSFLLRQPTEEARSREYLRFIEDLRLAGSLITS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggttgtcctggcccacagtctggatttcgtgacatggcgcaacgccacgcgc
acactggccctgcacggtattcccgccacggatatcatctggcgcatccgcgatcccgcg
gatgcggccatgcagaccggcattaccgccccccttcacgccgacacatcgccacgctcc
acctttggcgttccccgggccatgatgcgcctggtgcaggacatattgcaggccgaaacg
ccggatcgctttgaccttgcctatcgcctcgtcctgcggctggccactggcgaagaccct
gcccgcagacctgccgatgacgccgaaatcctgcgcgcccggcacatcgcacaggacgtg
cggcgcgaaacactggcctttcgcacccatgtcgcgacatcccacgaccccacgcaggcc
atcatatgggacgccgccgacagccttgtcgcatactgcaacgcacgctttgtcacgctg
caacgttcattccatccatggcacgttcagatgggggaacgcgtgatgcggtgggacggc
accaccctgcatcccggcacgccccttgaaggcgcggatcccgcctccttcccctcaccc
gccctccctctggcggaggggatggacatcgaacgcatcacagccctgcccgccgtggca
gaggccgcgcgatcctgcctgacctgcgccatggcgcaccatgcgacccagaccgtcttt
ggcgaagggaccaccaccgcgtcactgatgttcgtcggggaacagcccggcgatcaggaa
gatctggcgggccgtccctttgtcggcccggcggggcaactgttcgaccgcgccctgcat
gaggtcggcatcgcacgcgatgatgtttatgtgaccaatacggtcaagcatttcaaattc
ttcaaccgcaatggccgacgcatccaccaaaaagcaggcatggaggaaatccgtgcctgc
gccccatggctgcatgcggaacgccgcatggtgcgcccacgcctgctggtcatgctcggc
gcgactgcggccagcgcaatcctgcaacgctctgtcgttataggacatgaaagatcccgc
ccgatcacacttgatgacgggacatgcggactggtgacggtgcatccctctttcctgctg
cgccaacccacagaggaagcgcgatcgcgcgaatatctgcgctttatcgaggatctgcgc
cttgcggggagcctgataacatcatga
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