Novacetimonas hansenii: IFJ82_08955
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Entry
IFJ82_08955 CDS
T06979
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
kha
Novacetimonas hansenii
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kha02000
]
IFJ82_08955
Transporters [BR:
kha02000
]
Other transporters
Pores ion channels [TC:
1
]
IFJ82_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
QOF94102
LinkDB
All DBs
Position
complement(2067669..2073479)
Genome browser
AA seq
1936 aa
AA seq
DB search
MHNSPLPARVTRFPAGGNPHSYPRLQHVLRAGTSLSRAVSSSPWSVAVLAALISTGVPHV
AMGQSAGGVVASAGYGGVGGAGNGGGGAGGGWPATSLAGAGAASSDGVGGAGHDGLSLSG
ESGAGGAGGVVGSAGTTAYDNSFNAGGGGGGGAGVIESAGASVTSAITGGRGGGGGNSTW
NGGGGGGGGGGAGVIATDSVTVSNVVTGGTGGNGGEAGVSSEGGGGGGGGGGDGLDLLAS
GNATATTSTNSASITGGAGGTGGAGQAVSGAANTNGGGGAGGVGVAFMGQGLTLANAGSI
TGGAGGTGGSVGAGGVGLVMVGGDTVDNSGSITGGMAGDGTTQADAILASGTGNALLLEN
GSTLSGNIEIAASSGLAIASGGAGTLNNAIVMDDASSALSFTKGTGDALDVSGVISGAGA
VTVADGAHVVLSGVNSYAGGTTIDGGSLSISSDSALGNTAGGLSLTDNGNLETTANVTTA
RSIMLGTGGGEISPDAGTTLNVTAPVSGTGGLTMDGAGALVLEGSNTYTGVTTISSGTLE
LSGAGSIATSGGVVDNGTLDISGSSMEANSVASLSGNGNVALGEETLVLTNASGTFGGVI
ADGGVAGGTSGSLNLTGGTETLTGVNTYTGSTQISSGTLALAGDGSIASSSLLSMYTGGV
LDISGTSDGASVTAINDANATIALGGNTLTIGAGAKGVETPELLLAGGVSGNIVNGVVGP
IVDGGISGGVGGGITLTNPGTSGSTVITIFGGENTYTGATTIGSGTALLLASASTLGETD
GSSSQASIASSSRVVDNGIFDISLNSTVASNTSDTNSDSNNDTQWTIAASSTAITSLAGN
GVVSLGSQNLLLTDASDTFSGTITNDSIANQQLGTQTDTVGGSLTLAGGHETLTGVNTYT
GGTTIEAGTLTGTTASFGSGAIVDNGTLDIDQSTNGTLTNLVSGTGMLFKDGTGTLSVAQ
AETYTGATSINAGTLALTGDGSIAASSGVTLSGGTFDISGTTDGASIASLSGNSGGAVAL
GGETLTLTDAAGSFAGTIAGTGDVTLLDGRETLTGNNSYTGETTISGGTLALAGDGSIAT
SSGVTLSGGTFDISGTTDGASIASLSGNSGGAVALGGETLTLTDAAGSFAGTIAGTGGVT
LLDGHETLTGNNSYTGETTISGGTLALAGDGSIAASSGVTLSGGTFDISGTTDGASIASL
SGNSGGAVALGGETLTLTDAAGSFAGTIAGTGGVTLLDGHETLTGNNSYTGGTTITGGTL
TGTTGSFGTGEIVDNGTLELRQSADGALTNMVSGTGALVIDSTGNMTLSGVNSYTGGTTL
AGGALTVASASALSTGALNMAQGTTLNFGADGLVLSNALVLNGDPTVNVASGQGTLSGTL
SDGTSPGDLVKVGAGTLILSGDSTYSGGTEIADGTLEVDGSIVSPVVADAGTTLAGTGTV
GTTTISSGGTLSPGNDGDPMGTLTVQGNLTMAAGSNYVVNLSEDGGHDLVSVQGKATLEG
GTVRSITADGSWNTNVRYTILSATDGVSGKFASVTSNLAFLNPILTYSADDVYLLLGRNT
VSFASVGDTRNERAVGGAMDSISSGSLFNALVQTDASTARHALNGLSGELHASARTALIQ
DSYYIRDAAIERLRGADCERGAASGMKTASANGQRTDGACRSEHAALWMQAYGSFGHNAG
DGNASGMGHSVGGFVLGADAPVLGWHVGGLVGYGHSTFDSSGVSSYGHSSNVSLGGYAGT
HWGRLALRMGATYTWDMLSMTRNARFTGFSDRLSSRYNGGTAQAFGDIGYHLDAGPVGIE
PFADIAYVNLHTDRFSEHGGAAALAGRALDTGVTYSTFGARFSSSFNAGGVVLMPNAMLG
YRHAFGLTMPTAREAFMSGGDTFEVAGVPLAQDTAVVKLGLRAKLSRVLDIGLSYIGQYG
RRSVDSGLTGNIRVKF
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgcataacagcccccttcctgctcgggtcacccgttttcctgcgggtggcaacccacac
tcctatccgcgtttgcagcatgttctgcgtgcaggcaccagcctgtcgcgtgctgtttca
tcttcgccctggtcggttgccgtgctggcggccttgatcagtacgggcgtgccccatgtg
gcgatggggcagagtgctggcggggtggtggcgtcggctggatatggcggcgtgggcggt
gccggtaatggtgggggcggcgctggtggcggttggcccgcaacttcgctggcaggcgcg
ggtgccgcgtcgtccgacggtgtgggcggcgccgggcatgacgggttgagccttagtgga
gaaagcggtgcgggcggtgcgggcggcgtagtcggttccgcaggtaccacggcttatgat
aacagcttcaacgcaggcggcggcggtggcggcggggctggcgtgatcgaaagtgccggc
gcatccgttacgtccgccatcacgggggggcgtggcggtggcgggggaaacagcacctgg
aacggcggcggtggcggcggtggcggcggtggggccggtgttattgcgaccgacagtgtt
acggtgtccaatgtcgtaactggcgggaccggcgggaacggtggtgaggcgggtgtctcc
agtgagggcggcggcggcggtggcggcggcggtggcgatggcctcgacctccttgccagt
gggaatgccacggccacgaccagtactaacagtgcgagcatcacaggtggtgcaggtggc
accggtggcgcggggcaggccgtcagtggtgcggccaacacgaatggtggcggtggcgcc
ggtggtgtcggcgtggcctttatggggcaggggctgactcttgccaatgcgggatcgatt
accggtggtgcgggtggcacaggcggaagtgtcggtgctggtggtgtcggccttgtcatg
gttggtggcgatacagtggataattcggggtccattaccggcgggatggctggtgatggc
acaacgcaagccgatgcgatccttgccagtggtaccggcaacgcactgttactggaaaat
ggtagtaccctttcaggcaatattgaaattgctgcgtcctctggcctcgccatcgcgtca
gggggggcgggcacgctgaataacgccattgtaatggatgatgcgtcgtccgcgctgtcc
tttaccaaggggacgggcgatgcgctcgatgtttctggtgtgatttccggtgcgggtgcc
gtcacggtggccgacggggcgcatgtggtcctcagtggtgtcaattcatatgcggggggg
accacgattgatggcggaagcctgtcgatctcatctgattccgcgttgggcaatacggct
ggcggcctaagcctgacggataacgggaacctggagacaacagcgaacgtcacgactgcc
cgtagcatcatgcttggcacaggggggggcgaaattagccccgatgcaggcacaaccctg
aacgtgactgcgcctgtcagtggcacgggcggacttacgatggatggggcaggggcactg
gtgctggaaggtagcaatacctataccggggtcacgacgatcagttccgggacattggaa
ctttcgggggcaggttcgatcgcaacgtcaggcggagttgttgataacggaacgctcgat
atttcagggtcctccatggaggcgaattcggtcgcatccctgtcgggtaatggtaatgtt
gcattgggcgaagagacgctggtgttaaccaatgccagtggcacgtttggcggggttatt
gccgatggtggtgtagcaggcggcaccagtggcagtctgaatctgacgggcgggaccgag
acacttaccggggtcaatacctataccggatcgacacagatttcatcaggaacgctggca
ctggcgggtgatggaagtattgcgtcttccagcctgctctcaatgtataccggcggtgtt
cttgatatttcaggcacatccgacggtgcatccgtcactgccataaatgatgcaaatgca
acaatcgcacttggcggcaataccctgacaatcggggcaggggccaagggagtggagaca
ccggaactgcttctcgccggtggtgtcagtggcaatattgtgaacggggttgtcggcccg
attgtggatggtgggatcagcggtggtgtcgggggcgggataaccctcacgaatcccggc
acgtcagggtcgactgtcatcaccatctttggtggggagaacacttataccggtgcgacg
accatcggtagtggaactgctttattgcttgcctctgcaagtacactcggagagacggac
ggctcatcctcacaggccagcatagcatcatccagccgtgtggtggataatggtattttt
gatatctcgcttaacagtacggtggcatccaacacatcggatacaaacagcgatagcaat
aatgatacgcagtggacgatcgccgcatcttccaccgcgattacatcgttggctgggaat
ggcgttgtgtcactgggcagccagaacctgctgctgacggatgcatcggatactttttcc
ggcacgattaccaatgatagcatcgccaatcagcagctcggcacacagacagatacagtc
ggcggcagcctgaccctggcggggggacatgaaaccctgacgggcgtcaatacctatacg
ggggggaccacgatcgaggctggcacgctgacgggtacgacagcaagtttcggcagcggt
gcgatcgtggataacggcaccctggatatcgaccagtcaacgaatggaacgctaaccaat
ctggtttctggcaccggcatgctgttcaaggatggaaccggcacgctgagtgtggcgcaa
gctgagacctataccggggcaacgtcgatcaatgcaggtacgctggcgctgacgggtgat
ggtagcatcgcggcctcaagcggggttacgctcagcggcggtacatttgatatttccggc
accacggatggggcgtcgattgcctccctgtcgggcaatagcggtggcgccgttgcgttg
ggtggtgaaacgctgactctgaccgatgctgcggggagcttcgcgggcaccattgccggg
acgggggacgtgacgctgcttgatgggcgtgaaacgctgacgggcaacaatagctatacc
ggcgagaccacgatttccggtggcacgctggcactggcgggtgatggcagcatcgcgacc
tcaagcggggttacgctcagcggcggcacatttgatatttccggcaccacggatggggct
tcgattgcctccctgtcgggcaatagcggtggcgcggttgcgctgggtggtgaaacgctg
accctgaccgatgcggcggggagcttcgcgggcaccattgccgggacggggggcgtgacg
ctgcttgatgggcatgaaacgctgacgggcaacaatagctatacgggtgagaccacgatt
tccggtggcacgctggcgctggcgggtgatggcagcatcgcggcctcaagcggagttacg
ctcagcggcggcacattcgatatttccggcaccacggatggggcttcgattgcctccctg
tcgggcaatagcggtggcgcggttgcgctgggtggtgaaacgctgaccctgaccgatgcg
gcggggagcttcgcgggcaccattgccgggacggggggcgtgacgctgcttgatgggcat
gaaacgctgacgggcaacaatagctataccggcgggaccacgattaccggcggtacgctg
acgggtacgacgggaagtttcggcacaggcgaaattgtcgataatggtaccctggaactc
cgtcaatcagcggacggtgcgttgacgaatatggtttcgggcactggtgcgctggttatt
gacagcacgggcaacatgacgttgtcgggtgtgaacagctacaccgggggcacgacgctt
gctgggggggcactgacggttgccagcgcatcagccctcagcacgggtgcgctgaacatg
gcacagggcacgaccctcaatttcggtgcggatgggctggtgctgtcaaatgcgctggtc
ctgaacggtgatcccaccgtcaatgtggccagtggccagggtacgctatctggtacgctt
tcggatggcacatcgccgggcgatctggtcaaggtcggggcaggcacactgatcctttca
ggggacagtacctatagtggcggcaccgaaatcgctgacggcacacttgaagtcgatggc
agcatcgtcagtccagttgtcgcggatgcaggcaccaccctggcgggcactggtacggtc
ggcaccacgaccatttcttcgggagggacgctctcgcccgggaatgatggtgatccgatg
ggaaccctgaccgtccaagggaacctgacgatggccgcaggttcaaattacgtggtcaac
ctgtccgaagatggtggccatgatctggtttcagtgcagggtaaggccacactggaaggt
ggtactgtccgcagtatcacggcagatggaagctggaacacgaatgtccggtatacgatc
ctcagtgccacggatggcgtgtcggggaaattcgcatccgtgacgtcgaaccttgctttt
ctgaacccgatcctgacctatagcgcggatgacgtctatctgcttctggggcgcaataca
gtcagtttcgcgtcggtgggggatacacgcaacgaacgtgccgttggtggcgcaatggat
agcattagcagcggatcgttgttcaatgcgttggtccagacggatgccagcactgcacgt
catgccctaaacggcctgtcgggcgaactgcatgcatctgcccgtaccgcgctgattcag
gacagctattacattcgcgatgcggcaatagagcgtctgcgtggcgcggattgcgagcgc
ggtgcagccagcggcatgaaaacggcatctgcgaatggacagcggaccgacggggcctgc
aggtctgaacatgcagcattgtggatgcaggcctatggatcgttcgggcataatgcgggc
gacgggaatgcgtcaggcatggggcattctgttggtgggttcgtgctgggggcggatgcg
ccggtgttgggctggcatgtcggtgggctggttggatatggacattccactttcgacagt
tccggggtctcgtcctatgggcacagcagcaatgtcagccttggtggatatgccgggacg
cattggggacgtctggcgctgcggatgggggcgacctatacgtgggatatgctgtccatg
acccgtaatgcgcgctttaccggcttttccgatcggttgagcagccgttataacggcggc
acagcgcaggcgtttggggatattggctatcatcttgacgcggggccggttgggatcgaa
ccttttgccgatatcgcctatgttaacctgcatacggaccgtttttccgaacatggcggt
gccgctgcgcttgcgggacgtgcgcttgataccggggtgacttattccactttcggggcg
cgtttctcttccagcttcaatgccggtggtgttgtgttgatgcccaatgcaatgctggga
tatcgccatgcgttcggcctgaccatgccgactgcgcgtgaagccttcatgtccggcggt
gacacattcgaggttgccggtgtgccgttggcccaggataccgcagtcgtcaagcttggc
ctgcgtgcgaagctgagccgggttctcgatatcggtctgtcctatatcggtcagtatggt
cgtcgttcggtggatagcgggctgacggggaatatccgggtgaaattctga
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