Novacetimonas hansenii: IFJ82_11680
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Entry
IFJ82_11680 CDS
T06979
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kha
Novacetimonas hansenii
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kha03032
]
IFJ82_11680 (gyrB)
03400 DNA repair and recombination proteins [BR:
kha03400
]
IFJ82_11680 (gyrB)
Enzymes [BR:
kha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IFJ82_11680 (gyrB)
DNA replication proteins [BR:
kha03032
]
Prokaryotic type
DNA Topoisomerases
IFJ82_11680 (gyrB)
DNA repair and recombination proteins [BR:
kha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IFJ82_11680 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QOF96760
LinkDB
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Position
complement(2674598..2677015)
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AA seq
805 aa
AA seq
DB search
MPVTGADYDAASISVLKGLDAVRKRPGMYIGDTDDGSGLHHMAFEIIDNAVDEAQAGYAT
TCIVTLNGDGSVTVRDNGRGIPTDMHHEEGISAAEVVLTKLHAGGKFNQNSYKVSGGLHG
VGAAVVNALSEWMEVRIWRNGQEHMIRFRAGERDAPLSVVGDSDEPRGTQVTFKPSAETF
AIVEFQFSVLERRLRELAFLNSGLAIILRDERHTPVREEAFHYEGGLSAFVEWLDHGKTP
IVEPPITGSLQNDDNGIKVEFALTWNDSFHETMLCFTNNIPQRDGGSHLAGFRQALTRIV
GRYAEANASKKDSHALAGEDMREGLTAVLSVKVPDPKFSSQTKDKLVSSEVQPVVHAAAA
DMISHWFETHPKEARQIVAKVMDAAAAREAARRARELTRRKGVLDISSLPGKLADCQERD
PAKSELFIVEGDSAGGTAKQGRDRRFQAILPLKGKILNVERARFDRMLGSAEIGTLITAL
GTGIGRGDVEHGGFSIEKLRYHRIVIMTDADVDGSHIRTLLLTFFFRQMPELIENGYLYI
AQPPLYRAKRGNDERYLKDDAALEQYLLDKALAHATLRYGDGREVTGEAIHTDVAFIRDV
ARALSRLAVRAPVWVLEQAAIAGALSANPAATPERVIALQSRLDAVSMESERGWKVAASA
DGLEMARSVRGVGEVYRLDPASLRSAEVRWLAEHHGRIATDFDSKVELSLDSQTIALDGP
ASVYERIIAQGRRGLSINRFKGLGEMNDAQLWETTLDPAMRTLLQVRVGDVENAAQVFST
LMGDVVEPRRDFIVGNALKVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
attcccgtcacaggtgcggattatgatgcggcttccatatcggttctcaagggactggac
gcggtgcgcaagcgtccgggcatgtatatcggtgacaccgatgacggttccggcctgcac
cacatggcgttcgagatcatcgacaatgcagtggacgaggcgcaggccggttatgcgacc
acctgtatcgtgacgcttaatggtgacggcagcgtcaccgtgcgagacaatggtcgtggc
attcccaccgacatgcatcatgaggaagggatcagcgcggcggaagttgtcctgacgaag
ctgcatgcaggcggcaagttcaaccagaattcctacaaggtatcagggggcctgcacggc
gtgggggccgcggtcgtcaatgccctgtccgaatggatggaggtgcggatctggcgtaac
gggcaggaacatatgatccgctttcgcgcgggcgaacgcgatgcgccgctcagcgtggtg
ggggacagtgacgaaccgcgtggcacacaggtcacgttcaagccgagtgccgagaccttc
gccattgtggaattccagttttccgtgctggagcgccggctgcgcgaactggccttcctc
aattccgggctggccatcatcctgcgtgacgaacgccataccccggtgcgggaggaagcg
tttcattatgaaggcggcctgagcgcctttgtcgaatggctggaccatggcaagaccccg
attgtggaaccaccgattaccggcagcctccagaatgatgataatggcatcaaggtcgaa
ttcgccctgacatggaatgacagtttccatgaaacgatgctgtgcttcaccaacaatatt
ccgcagcgcgacggcggatcgcatcttgcgggtttccgccaggccctgacacgcatcgtt
ggccgctatgcggaggcgaatgcctccaagaaggattcccacgcccttgcgggggaagac
atgcgcgagggcctgacggcggtgctgtcggtcaaggtgccagatcccaaattctcgtca
cagaccaaggacaagctggtgtcgtcggaggtgcagcccgttgtgcatgccgccgccgcc
gacatgatctcccactggtttgaaacccatcccaaggaagcgcgccagattgtcgcaaag
gtgatggatgccgccgccgcacgtgaagcggcgcggcgcgcaagggaattgacgcggcgc
aagggggtgctcgacatctcctctcttccggggaagcttgccgattgccaggaacgtgac
cctgccaaatccgaactgttcatcgtggagggagactcggcagggggaacggccaagcag
gggcgtgaccggcgtttccaggcgatcctgccgctgaagggcaagatcctgaatgtggag
cgcgcgcgctttgaccgtatgctggggtcggcggaaatcggcacgctgattaccgcgctg
ggcacgggcatcgggcgtggtgatgtggagcatggcggcttttcaatcgagaagctgcgt
taccatcgcatcgtcatcatgaccgacgccgatgtcgacggctcacacatccgcacgctg
ctgctgacgttctttttccgccagatgcccgaactgattgaaaacggctatctctatatc
gcgcagccgccgctgtaccgcgccaagcgtggtaatgacgaacggtatctcaaggatgat
gcggcgctggagcaatatctgctcgacaaggcgctggcgcatgcgaccctgcgttacggc
gacgggcgcgaagtcacgggggaggcaatccataccgatgttgcctttatccgtgacgtg
gcgcgcgcgctgtcgcgccttgcggtgcgtgccccggtctgggttctggaacaggcggcg
atcgcgggtgcgctgtcggccaatccggcggccacgcccgaacgtgtcattgcattgcaa
tcgcgtctggatgccgtctccatggaatcggagcgtggctggaaggtcgcggcaagtgcc
gacgggctggaaatggcgcgtagcgtgcgtggcgtgggcgaggtctatcgtcttgatccc
gcctccctgcgcagtgccgaagtccgctggctggcggagcatcatgggcgcatcgcaacc
gatttcgacagcaaggtggaactgtccctcgacagccagaccatagcgcttgatggcccg
gcctcggtttatgaacgtattatcgcgcaggggcggcgcggcctgtcgatcaaccggttc
aagggactgggcgagatgaatgacgcgcagttgtgggaaaccacgcttgatcccgccatg
cgcaccctgctgcaggtgcgggtgggcgatgtggaaaacgcggcgcaggtgttctctacg
ctgatgggcgatgtggttgaaccccggcgcgattttatcgtggggaacgccctgaaggtt
gccaacctcgacgtctga
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