Novacetimonas hansenii: IFJ82_13055
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Entry
IFJ82_13055 CDS
T06979
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
kha
Novacetimonas hansenii
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kha03009
]
IFJ82_13055
Enzymes [BR:
kha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
IFJ82_13055
Ribosome biogenesis [BR:
kha03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IFJ82_13055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QOF94781
LinkDB
All DBs
Position
complement(3000041..3001018)
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AA seq
325 aa
AA seq
DB search
MSVVTLTVSDDEADIRLDRWFRRHYPHLTQGALQKLCRTGQIRVDGGRVTTSTRLAPGQA
VRVPPIPQASRPAPVTHRTLDDRQVREIRKMVIYSDDQVIVLNKPAGIAVQGGPGITHHI
DGLLDGLREQPDDPRPRLVHRIDRDTSGLLLLARTPGVAAKLAASFRSRDVRKVYWAVTV
GRPTPASGIVDQPLTRLGAGAGAIMVVAGRRDKDAVHALSEYEVLDAAGRKLSWLALSPL
TGRTHQLRVHCEALGTPILGDPKYGDDRAHVEGFPDQLHLHARMLDLPHPAGGRLVVSAD
LPAHMKETFRQLGFTAPAAPAPQRA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgtgacccttaccgtcagtgatgacgaagccgatatccgccttgaccgctgg
ttccggcggcattacccgcacctgacgcagggggcgttgcaaaagctgtgccgcacgggg
cagatccgtgtggatggcggtcgtgtgaccacatcgacccgccttgcccccggtcaggcg
gtgcgtgtgccccccatcccgcaggccagccgtcccgcccccgtgacgcaccggacgctt
gacgatcgccaggtgcgcgaaatccgcaagatggtcatctacagtgatgatcaggtgatt
gtcctgaacaagcccgcaggcattgctgtgcagggcgggccgggcatcacccatcatatt
gacgggctgcttgacggattgcgtgaacagcctgacgacccgcgcccgcgccttgtccat
cgcatcgaccgtgacacgtcggggctgttgttgctggcgcgcacgcccggggtcgcggca
aagcttgccgcgtcctttcgtagccgtgacgtgcgcaaggtctactgggcggtgacggta
ggccgtcccacgcctgcatcgggtatcgtggatcagccgctgacccgccttggcgcgggg
gcgggggcgatcatggttgttgcggggcggcgcgacaaggatgcagtacatgcgttgtcg
gaatatgaagtgctggacgcggcgggacggaaactgtcatggctggcgctgtcgccgctg
acggggcgcacccatcagcttcgtgtgcattgcgaagcgctgggtaccccgatcctcggc
gatccgaaatatggcgatgatcgtgcccatgtcgaaggtttccccgatcagttgcacctg
catgcccgtatgctggacctgccgcatccggcgggtgggcggctggtggtgtcggcggat
ctgcctgcgcacatgaaggagacgttccgccagcttggctttacggcgcctgcggccccc
gcgccacagcgcgcatga
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integrated database retrieval system
