Novacetimonas hansenii: IFJ82_13465
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Entry
IFJ82_13465 CDS
T06979
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kha
Novacetimonas hansenii
Pathway
kha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IFJ82_13465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kha03400
]
IFJ82_13465
Enzymes [BR:
kha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFJ82_13465
DNA repair and recombination proteins [BR:
kha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IFJ82_13465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
SH3_HelY
AAA_30
AAA_16
Zn_ribbon_6
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QOF96814
LinkDB
All DBs
Position
3094361..3096709
Genome browser
AA seq
782 aa
AA seq
DB search
MPDLLESQPDSPAASADARPDPAHDTPHDGARDRTRDGARNGARDGAQNAPQRVRVMLPL
PFAGALDYRMPPAGTLHPGDIVTVPLGRRTETGVVWDTHLRLPPEFMPPPMPTVATGRLR
AVSARLDLPPLPAALRQFIDWVAAYTLSPPGMVLAMALRANAMAAAPRPAAGWAVTDTLP
PDLRLTPARHRVLEIARLGTPLSTTELANRAGVGASVVRGLAQAGCLREVALPTPPAFGM
PDPTHAPPVLEGEQADVARALRNTVAEDRFSITLLEGVTGSGKTEIYMEAIAACLEKGLQ
ALVLLPEIALSSQWTGRFARRFGTQPALWHSDLGTRLRRVTWRSVADGAARVVVGARSAL
FLPFARLGLIIVDEEHETSFKQEEGVTYNARDMAVVRARMDAAPIVLVSATPSLETLANV
GAGRYRHLRLGARHGNASMPQVRTLDMRADPPERGLFLSPVLTGAIRDAIERQEQAMLFL
NRRGYAPLTLCRTCGHRMQCPNCTAWLVEHRARHILTCHHCGHNEQMPPACPSCNAEDSL
TPIGPGVERITEEARATFPDARILVMASDTLHGPAATADAVERIARREIDLVIGTQIVAK
GWHFPHLTVVGIVDADLGLGGGDLRAAERTVQLLHQVAGRAGRAEAAGHVLLQSYVPDHP
VMEALVSGDFTSFMEQEAEQRRPGFWPPFGRLVALIVSADTPEAADMTARALGHAAPHLD
GVQVLGPAPAPLAILRGRHRQRLLLRARRNIPVQPIMREWLSRVKPERGARVDVDIDPIS
FL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgctggagtcgcaaccggactcgcctgccgcctccgccgatgcgcgtcct
gatcctgcccatgacacgccccatgacggggcacgcgacaggacacgggatggggcacga
aacggggcacgagacggggcacagaacgcgccacaacgggtgcgcgtcatgctgccgctg
ccattcgctggtgcgctggattaccgcatgcccccggcgggcacactgcatcccggggat
atcgtgacagtccccctgggccgacgcaccgaaaccggcgtggtgtgggacacacatctg
cgcctgccccctgaattcatgccgccgcccatgcccaccgtcgccaccggccgcctgcgc
gccgtcagcgcacggctggacctgccccccctgccggccgccctgcgccagttcatcgac
tgggtcgcggcctatacgctatcaccgccgggcatggtgctggccatggcgttacgggcc
aatgccatggccgccgccccgcgtccagccgccggatgggcggtcacggacacgctcccc
cctgacctgcgcctgacccccgcacggcacagggttcttgagatcgcgcgtctcgggacg
ccactatccacaaccgaactggcaaaccgggcgggtgtcggggccagcgtcgtgcgtggc
cttgcacaggcgggttgcctgcgtgaagtggcattgccgacaccccccgcctttggcatg
cccgaccccacccacgccccccccgtgctggagggggagcaggccgacgtcgcgcgcgcc
ctgcgcaacacggtggcggaggaccggttctcgatcacgctgcttgaaggggtgacagga
tcgggcaaaaccgaaatctatatggaggccattgccgcatgccttgaaaaaggattgcag
gcgctggtcctgctgcctgaaattgcgctgtcatcacaatggacgggacgtttcgcgcgg
cgttttggcacacagcccgcattgtggcattccgaccttggcacgaggttgcggcgcgtg
acgtggcgttcggtcgccgatggcgcggcacgggtggtggtgggcgcgcgttcggccctg
ttcctgccgttcgcacgccttggccttatcattgtggatgaggagcacgaaacctccttc
aagcaggaagagggcgtcacctacaacgcgcgggacatggcggtggtgcgcgcacgcatg
gacgcggcccccatcgtgctggtttccgcgacgcccagcctggagacactggccaatgtc
ggcgcgggacggtaccgccacctgcgtctgggcgcgcggcatggcaatgcatccatgcca
caggtgcggacactcgacatgcgtgccgacccgcccgaacgcgggctgtttttatccccc
gtgctgaccggcgcgatcagggatgcgatcgagcggcaggaacaggcgatgctgttcctc
aaccgccgtggctatgcgccgctgacactgtgccgcacctgcgggcaccggatgcagtgc
ccgaactgcactgcatggctggtggaacatcgcgcgcgtcatatcctgacatgccatcac
tgcgggcataacgaacagatgccgcccgcatgcccgtcatgcaacgccgaagacagcctg
acccccataggccccggcgtcgaacgcattacagaagaagcgcgcgcgacctttcccgac
gcccgtatcctggtaatggccagcgatacactccacggtcctgcggccaccgcagacgcg
gtcgaacgcatcgcccgtcgcgaaatcgacctggtgatcggcacgcagatcgtcgccaag
gggtggcatttcccgcacctgacggtggtggggatcgtcgatgcggaccttggccttggc
ggtggcgacctgcgcgcggccgaacgcacggtgcaactgctgcaccaggtggccgggcgc
gcaggccgtgcagaggcagcgggacatgtcctgttgcaaagctatgtgcccgaccatccg
gtgatggaagcgctggtttcgggcgatttcacaagcttcatggagcaggaagccgaacag
cgccgccccggtttctggccccccttcggccgccttgtcgccctgatcgtaagtgctgac
acccccgaagccgccgacatgaccgcccgcgcactggggcatgcggccccgcaccttgat
ggtgtgcaggtgcttggccccgcacccgcgccacttgccatcctgcgcggacgtcacagg
caacgcctgttgctgcgcgcgcggcgcaacatcccggtccagccgatcatgcgcgaatgg
ctgtcacgtgtgaaacccgaacgcggggcgcgcgtggatgtggatatcgacccgatttcg
ttcctgtag
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