Kaistella haifensis: EG338_01320
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Entry
EG338_01320 CDS
T07805
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
khi
Kaistella haifensis
Pathway
khi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
khi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EG338_01320 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
khi03400
]
EG338_01320 (ruvB)
Enzymes [BR:
khi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG338_01320 (ruvB)
DNA repair and recombination proteins [BR:
khi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EG338_01320 (ruvB)
RecFOR pathway proteins
EG338_01320 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_3
TIP49
Rad17
nSTAND3
TsaE
NTPase_1
AAA_14
NB-ARC
NACHT
Bac_DnaA
RNA_helicase
AAA_33
AAA_18
AAA_24
NPHP3_N
Sigma54_activ_2
AAA_PrkA
AAA_28
IstB_IS21
ABC_tran
AAA_17
Parvo_NS1
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AZB20885
LinkDB
All DBs
Position
complement(253533..254555)
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AA seq
340 aa
AA seq
DB search
MPDFLHPDQENFSEEELLQEEKIRPQSFQDFAGQRKTLDNLEVFVAAAKNRGGALDHVLL
HGPPGLGKTTLAHIIANELGVGCKITSGPVLDKPGSLAGLLTNLEENDVLFIDEIHRLSP
IVEEYLYSAMEDFKIDIMLESGPNARSVQIGLNPFTLVGATTRSGMLTKPMLARFGIQSR
LEYYTVELLGMIIERSARVLGVPIYEDAALEIARRSRGTPRIANALLRRVRDFAEIKGNG
EIEIEITKFALKSLNVDEFGLDDMDNKIMRVMIENFRGKPVGISALATSIGENPETLEEV
YEPFLIQEGFIIRTPRGREVTEKAYKHLNISVPKRPDELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattttcttcacccagatcaagaaaatttttccgaagaggaattgttacaagaa
gaaaaaatccgtccgcagagttttcaggattttgccgggcaacgaaaaacattggacaat
ctagaagttttcgtagcggctgccaaaaatcgtggtggtgcgctggatcatgttcttttg
cacggtccaccgggattgggaaaaacaactttagcccacatcatcgcgaatgaattgggt
gtaggatgtaaaattacttcgggtccggttttggacaagccgggaagtttggcaggactt
ttaaccaatttggaggaaaacgatgtgctttttattgatgaaatccaccgactttcgccg
attgtggaagaatacttgtattccgcgatggaagattttaaaatcgatatcatgctggaa
agtggccccaatgcgcgatcggtacaaatcgggttgaatccttttaccttggttggtgca
accacccgttccggaatgctcaccaaaccgatgttggcaagattcggaatccaatcgcga
ctggaatactacaccgttgaacttttaggaatgatcattgaaagaagtgcgcgggttctc
ggggttccgatttatgaagatgctgcattggaaatcgcccgaagaagccgtggaacgccc
agaattgcaaacgctctgctacgaagagttcgggattttgcggaaataaaaggcaatggt
gaaatcgagattgaaattaccaaattcgcattaaaatcattaaatgttgacgaattcgga
ttggatgatatggataataaaatcatgcgtgtgatgattgaaaatttccgaggaaaacca
gtgggaatttccgctttggcaacttccatcggtgaaaatccggaaacgttggaggaagtt
tatgaaccatttctcattcaggaaggtttcattatcagaacgccgagaggacgggaagta
acggaaaaagcgtataaacatttgaatatttcagtgccgaaaagaccggatgagcttttt
taa
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