Kaistella haifensis: EG338_01925
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Entry
EG338_01925 CDS
T07805
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
khi
Kaistella haifensis
Pathway
khi03410
Base excision repair
khi03430
Mismatch repair
khi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
khi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EG338_01925 (recJ)
03430 Mismatch repair
EG338_01925 (recJ)
03440 Homologous recombination
EG338_01925 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
khi03400
]
EG338_01925 (recJ)
DNA repair and recombination proteins [BR:
khi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EG338_01925 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EG338_01925 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EG338_01925 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
AZB22949
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Position
367354..369063
Genome browser
AA seq
569 aa
AA seq
DB search
MSQKWIYKPEPDADIVDGISSSLGFGTFESKILVLRGIDNYQKAREFFKPNLNDIHNPFL
MKDMQLAVDRIATAIENGEKILVYGDYDVDGTTAVALMYLNLSKIVDKKYLDFYIPDRNS
EGYGISNEGIDFAKENNFALIIALDCGIKAIDKIEYAKNLGVDFIICDHHLPGEEIPKAV
AVLDPKRKDCRYPFKELSGCGVGFKLCQGLNTIYKIPEAELFELTDLLAISIAADIVSMT
GENRVLAKQGLKVLRKSRNLGLRMLIPEDKLATFEISNIVFEIAPKINAAGRISHGKAAV
ELMVSDNLKQAQQIVNDIITLNDSRREMDMSSTTEALLQIEETGQLENYTTVVYGSNWNK
GVIGIVASRLIENYYKPTLVFTDGNNGELVASARSVADFDVHDALENCSEFFTKFGGHPA
AAGLSMEKDKFDLFREKFEKVVAEKIKEHQKEPSITIDSEVEVDDLNKDFFNFHRKLAPF
GPHNMKPVLALKNQRVAGYVKTMGKDAGHIKFYIKQESTGRNIECVGFKLGKFADQFREK
TFDIAFTAEENHWKGNVTYFLNIRDVKFH
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaatggatttataagcccgaacccgacgccgatattgtggatggaattagt
tcctcacttggttttggaacttttgaatctaaaatccttgttcttcgcggcattgataat
tatcaaaaagcgagagaatttttcaaaccaaatctcaacgatattcacaatccctttctg
atgaaagatatgcagctcgcggtagaccgaatcgcaactgccatagaaaacggagagaaa
atattggtctatggcgattatgatgtcgacggaactacggcggttgctctcatgtacctt
aatttaagtaaaattgtagataaaaaatatctcgatttttatattccagatcgaaattct
gaaggatatggaatctctaacgaaggaattgattttgcaaaagagaacaattttgcacta
ataatcgcactcgattgcggaataaaagccatcgataaaattgaatacgccaaaaatcta
ggggtagatttcatcatttgcgatcaccatttgccgggagaagaaattcctaaagccgtt
gccgttttagatccaaaaagaaaagattgccgttatccgttcaaagaactttcgggttgt
ggtgttggatttaaattatgccaaggactcaatacaatatataaaattccggaggcagaa
ttatttgaactcaccgatttgctagccatttccatcgcagcggatatcgtttcgatgacg
ggcgaaaacagagttttggcaaaacaaggtctaaaggttttaagaaaatcaagaaatttg
ggattaaggatgcttattccggaagataaattagcaacttttgaaatctcaaatatcgtt
ttcgaaattgctccaaaaattaatgcagcgggaagaatatcgcacggaaaagcagctgta
gaattgatggtttctgataatttgaaacaagcccaacaaatcgtcaacgatatcatcacg
ctcaatgattccagaagagaaatggacatgagcagtacaacggaagcacttttgcaaatc
gaagaaaccggacaacttgaaaattataccacggttgtttacggatcgaattggaataaa
ggtgtaatcggaattgtagcatcaagacttattgaaaactattacaagccaactttggtt
ttcaccgacggaaacaatggcgaattggttgcttcggctcgttctgtagctgattttgat
gtacacgatgcattggaaaattgctctgaattttttactaaatttggtggtcatcccgcc
gctgccgggctttccatggaaaaagacaaatttgatttattccgtgaaaaatttgagaaa
gtagttgctgaaaaaattaaagaacaccaaaaagaaccaagcatcaccatagattctgaa
gtggaagtggatgatttgaacaaggatttcttcaatttccacagaaaacttgcccctttc
ggacctcacaacatgaaaccggttttagccttaaaaaaccaaagagttgctggttacgta
aaaaccatgggaaaagatgctggtcacatcaaattctacatcaaacaggaatctacggga
cgaaacatcgaatgtgtcggatttaaattgggaaaattcgctgatcaattccgcgaaaaa
acttttgacattgcttttaccgccgaggaaaatcactggaaaggaaatgttacttatttc
ctaaatattcgcgatgtgaagtttcattaa
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