Kaistella haifensis: EG338_04240
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Entry
EG338_04240 CDS
T07805
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
khi
Kaistella haifensis
Pathway
khi03030
DNA replication
khi03430
Mismatch repair
khi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
khi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EG338_04240
03430 Mismatch repair
EG338_04240
03440 Homologous recombination
EG338_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
khi03032
]
EG338_04240
03400 DNA repair and recombination proteins [BR:
khi03400
]
EG338_04240
Enzymes [BR:
khi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EG338_04240
DNA replication proteins [BR:
khi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EG338_04240
DNA repair and recombination proteins [BR:
khi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EG338_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AZB21385
LinkDB
All DBs
Position
complement(866690..867916)
Genome browser
AA seq
408 aa
AA seq
DB search
MYSVIDIESNGAGFRKESIIEIAIYKYDGHEIVDQFISLVNPEGEITPFVQKLTKISPKM
VKTAPKFHEIAKRVVEITENTTLVGHNIDFDYRMLRQEFKRLGYTFKINTLDTIPLAKKL
IPEAQSYSLGKLVKSLGIPLVDQHRASGDAKATLDLFKLLMIKDKDSEIIQQHHEELNAK
TYLNKVRNLTQDLPSERGIIYFQNAEGKIIHSDFSDDLSKFAKILFNTKSKKLVKIQEEV
EQIYYELTGNDILAKLMMKTKGLQKRETLPFGLFHKNNKYFVEKVSLQKEAKPLLKFKSF
TQGLKAVSFLKKQEQYANPAVLEQKISLKNRNEMWISAGRTLGEKVFLIFEKGQLKSYGF
YDLHTQISTLKKIDALKIPVESTSSDLKNDLQLAILREDIEIIPLPTK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagtaatcgatatagaaagtaacggagccggtttccgaaaagaaagcatcatt
gaaatcgccatttataaatatgatggtcatgaaattgtagatcaatttatctctttggta
aatccggaaggcgagatcacaccgtttgtgcaaaaactcaccaaaatttcaccaaaaatg
gtgaaaaccgctccaaaattccacgaaattgctaaaagagtggtcgaaattaccgaaaat
acaactttggtaggtcataatattgatttcgattaccgaatgcttcgccaggagtttaaa
cggctcggttacacattcaaaatcaatactttagatacaattcccttagctaaaaaactc
attcctgaagcacaaagttattcattgggaaaattggtgaaatccttgggaattccattg
gttgatcaacacagagcttcaggcgacgcaaaagcgactttagatttattcaagttgctg
atgatcaaggacaaagactccgaaatcattcaacaacatcatgaagaattaaatgctaaa
acgtacctcaataaagtaagaaaccttacccaagatttgccatcagaaagaggaattatt
tatttccaaaatgcggaaggaaaaatcattcactcagattttagcgatgatttgagtaaa
tttgcaaagattctttttaatactaagtcaaaaaaactggtaaaaatccaagaagaagtt
gaacaaatttattacgaattaacaggtaatgatattctcgccaaactgatgatgaaaacg
aaaggtttgcaaaaaagagaaacgcttccgtttgggcttttccataaaaacaacaagtat
tttgttgagaaagtttccttgcaaaaagaggcaaaacctttactaaaattcaaatcattc
acccaaggtttgaaagcggtaagcttcctaaaaaaacaagaacaatacgcaaatccagct
gttttggaacagaaaataagcttgaaaaacagaaatgaaatgtggatttccgcaggacga
acgctgggcgaaaaagtattccttatttttgaaaagggccaactaaaatcttacggattc
tacgatttgcacacacaaatcagcacattgaagaaaattgatgcgttgaaaatcccagta
gaatcaaccagcagcgatttaaaaaacgaccttcaactggcgattcttagagaagacatt
gaaataattcctcttcctacaaaataa
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