Kaistella haifensis: EG338_06445
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Entry
EG338_06445 CDS
T07805
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
khi
Kaistella haifensis
Pathway
khi00521
Streptomycin biosynthesis
khi00523
Polyketide sugar unit biosynthesis
khi00525
Acarbose and validamycin biosynthesis
khi00541
Biosynthesis of various nucleotide sugars
khi01100
Metabolic pathways
khi01110
Biosynthesis of secondary metabolites
khi01250
Biosynthesis of nucleotide sugars
Module
khi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
khi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EG338_06445 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EG338_06445 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EG338_06445 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EG338_06445 (rfbB)
00525 Acarbose and validamycin biosynthesis
EG338_06445 (rfbB)
Enzymes [BR:
khi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EG338_06445 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AZB21750
LinkDB
All DBs
Position
1346149..1347240
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AA seq
363 aa
AA seq
DB search
MKNIIITGGAGFIGSHVVREFVKNNPDKKIINLDALTYAGNLENLKDIENEPNYVFEKAD
ITKVDELRKVFEKHQPDAVVHLAAESHVDRSITDPNAFINTNVIGTANLLNLCREFWTLN
PDHSHGNFPDGPRENLFYHVSTDEVYGSLGETGFFLETTAYDPQSPYSASKAASDHLVRA
YGNTYGMPFMVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHA
KAIHQLFFEAKTGETYNIGGFNEWQNIDLVKELIKQMDEKLGKPAGYSEKLITYVKDRPG
HDKRYAIDATKINKDLGWKPSVTFEQGLSKTIDWFLENKDWLENVTSGSYQDYYNEQYTD
STN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatcatcatcaccggaggcgccggatttatcggttcccacgtcgtaagagaa
tttgttaaaaataatccggataagaaaatcatcaacctagatgctttaacttatgccgga
aatcttgaaaatttaaaagatatcgaaaacgaacctaactacgtttttgaaaaagcagat
atcaccaaagtagacgaacttcgcaaagtatttgaaaaacaccagccggatgcagttgtt
catttggctgctgaaagccatgtggacagaagcatcaccgatccgaatgctttcatcaat
accaacgtgattggaactgccaatctgttgaatctttgtagagaattctggacattaaat
cccgaccattcccacggaaatttcccggacgggccgcgcgagaatttgttctaccatgtt
tctaccgatgaggtttacggaagtttaggagaaaccggtttctttttagaaactactgct
tacgatccgcagtcgccttattctgcaagtaaagccgcttccgatcatttggttcgcgct
tacggaaacacttacggtatgccgtttatggtatccaattgctccaataattacggaccc
aatcattttccagaaaagctgattccgctttgtatttcgaacattattaatgaaaaaccg
cttcctatttacggtgacggaaaatataccagagactggcttttcgttatcgaccatgcg
aaagcgattcaccaactgttctttgaagcaaaaaccggggaaacctacaatatcggaggt
ttcaatgagtggcaaaatatcgatttggtaaaagaactcatcaaacagatggatgaaaaa
ctaggtaagccagcaggttactcagaaaaattgataacttatgtgaaagaccgtccgggc
cacgataagcgttatgccatcgatgctaccaaaatcaataaggacttgggatggaaacca
tccgtaactttcgagcaaggtttaagcaaaacgatagactggttcctcgaaaataaagac
tggttggagaatgtaacgagcggttcctatcaggattactataacgagcaatatacagat
tctactaattaa
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