Kaistella haifensis: EG338_09685
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Entry
EG338_09685 CDS
T07805
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
khi
Kaistella haifensis
Pathway
khi03030
DNA replication
khi03430
Mismatch repair
khi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
khi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EG338_09685
03430 Mismatch repair
EG338_09685
03440 Homologous recombination
EG338_09685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
khi03032
]
EG338_09685
03400 DNA repair and recombination proteins [BR:
khi03400
]
EG338_09685
Enzymes [BR:
khi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EG338_09685
DNA replication proteins [BR:
khi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EG338_09685
DNA repair and recombination proteins [BR:
khi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EG338_09685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
DUF6492
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AZB22319
LinkDB
All DBs
Position
2010106..2014758
Genome browser
AA seq
1550 aa
AA seq
DB search
MYLIFDTETTGLPKNFNAPLTDSDNWPRMVQIAWQLHAQDGTLLENQDYIIKPEGYDIPF
NATRIHGISNKMANEEGRDLAEVLEEFKDVLQKAKVVAGHNIDFDYNIVGAEFFRKDMDN
VLEKIPSADTMELGTEFCQLGGGKNGRYKSPKLVELFEKLYGEQFDEAHNAAADVNATAQ
VFFEMMRNELIPADKLLISDAELQNFIKTHPNPIPPFGIIIRRQVADSKKKKKVDFGSFD
EIEIGDYFNFHNHSIYSSLQASSNISDLVDKAIRNDFAAAGLVDLGNMMGAFKFVSEVEK
ANGNIKKAYQEYLDKKQKANEEGIEFNEVEPRKDPLIPIIGCEFYISDRPEQKQFTKDDP
DRRTNVVLLAKNFKGYKNLAKLSSLGYVNGFYFGVPRISRKMIAEYKEDLIAFTAGTSGD
IPSTILEFGEQKGEEIFKWWKDTFGDDFYVQLQNHQVEEEEHLNEVLLEFAEKYEVKILA
QNETFYTEKSDANIQDILYCIKDGEKLSSPVGKGFGKRRGLPSSEYYIKDSDDLRQAFIQ
FPDAFEAYTELLAKFEPYTLKRDVLLPEFDIPKEFLSEEDKIDGGKRGENAYLRHLTYDG
AKKKYEEITDEIRDRLDFELEVIAKTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAAGSA
VAYCTGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDKIIKWVVEKYGKSNVAQ
IITYSILGGKSAIKDAGRVLDVSIPETNNIAKLVPSTPGMNIAKALSKFDKLNPEDKVLA
QEMKDILENPNDERFQVLSAAQRMEGCIRNTGIHACGVIITPEDISNLVPITIAAKDPDI
LVSQFDNSVAESAGLLKMDFLGLRTLTIIKHAIRLIKQRHNVDIDPDLIPLDDLKTFQLF
QEGRTVGIFQYESPGMQKYMRELKPTKFADLIAMNALYRPGPIKYIPNFINRKNGLEETV
YDLDETKEYLEETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQKDVLDKMYPKF
IEGGEKNNLDVDKLNKIWKDWEAFAEYAFNKSHSTCYALIAYHTAYLKANYPAEYMASVM
TNNLNNTKQITMFMEDCKGIGVDVLGPSVNESQYEFAVNDKGQIRFGLGAIKGIGEGPSE
AIVQARTSGRFTNIYDFFEKVPSSQINKRVVESLVIAGAFDEVDRYHRAQYFDIDISGRT
NLERLLRYGQSFQDSKNEIENSLFADFAEEVKIEPPKINPAPEWQNMHMLNKEKEIIGFY
LSAHPLDEYKYQFKFMQGALSKKEILESKKDDIIELEKVIAPIDIADVADEDDGLVDLEI
DILDGEEEMLMEDAPKKAEPKGNFNFLNLDEVDAFKDTVANQQPDLFNNDKLNWKEKQAM
KNNTPEYMVAGLVTEYVVKDGKNSGEKIAFITLEDYSGSYSFRLGDRDYMRLRDKIDVQR
FVIFKIKFAVLNDGRVFVNVSEVIDLKDSFEKFAKKMTIVIDINDLRREDIIFFKENFLE
NEGEQKLNFLVKNPEDQSNIELMAMRSQVNINGDLLEVIHNLHKYDVFLN
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaatttttgacacagaaaccacaggtttacctaaaaatttcaatgcaccatta
accgattctgacaattggccaagaatggtacaaattgcgtggcaacttcatgctcaagat
ggtacattgcttgaaaatcaggattatatcataaaacctgaagggtatgatattcccttt
aatgctactagaattcacggaatttcaaacaaaatggcgaatgaagaaggtagagatttg
gctgaagttttggaagaatttaaagatgttcttcaaaaagcaaaagtagttgccggtcac
aatatcgatttcgattacaacatcgttggtgccgaattttttcgaaaagacatggataat
gttttagagaaaattccttcggcagataccatggaactcggtacggaattttgtcagttg
ggaggtggaaaaaacggcagatacaaatctccgaaattggtagaattattcgaaaaacta
tacggagagcagtttgatgaagcgcacaatgctgcggcagacgtgaatgcaactgcgcaa
gtttttttcgaaatgatgcgaaatgagttgattccggctgataaacttcttatttctgat
gccgaattgcagaattttatcaaaactcatccgaatcctattccgccttttgggattatt
attcggagacaagttgcagattctaaaaagaagaaaaaagtagatttcggttcctttgat
gaaattgaaattggagattattttaattttcataatcatagtatttattcatcgttgcag
gcttcttcaaatatttcggacttggtagataaagcaattcgaaatgattttgccgcagca
ggtttggtggatttggggaatatgatgggtgctttcaaattcgtttctgaagtagaaaaa
gccaatggaaacatcaaaaaagcataccaagaatatcttgataaaaaacaaaaagccaac
gaagaaggaattgaatttaatgaagtcgaaccgcgaaaagatcctttaattccaattatc
ggttgcgaattttatatttctgaccgaccggaacaaaaacaatttaccaaagacgatccc
gaccgaagaacgaatgtcgtattgctggcaaaaaacttcaaaggttacaaaaatctggca
aaactttcgagtttaggctatgttaatggtttctattttggagttcctaggatttccaga
aaaatgatcgcagagtataaagaagatttaattgctttcacagcgggaacttcaggagat
attcccagcacgatattggaatttggtgagcaaaaaggggaagaaatattcaaatggtgg
aaagatacttttggtgatgatttttatgtacaacttcagaaccatcaagtagaagaagaa
gagcatttgaatgaagtgctcttggaatttgccgaaaaatatgaagtgaaaattcttgct
caaaacgaaacgttctacaccgaaaaatccgatgcgaatatccaggatattttatattgt
ataaaagatggtgaaaagttgtcttcgcctgtaggaaagggttttggtaagagaagaggt
ttgccgagcagcgaatattatattaaagattccgatgatcttcggcaggctttcatccag
ttccccgatgcatttgaagcgtacacggaattgctggcgaaatttgaaccctatactctt
aaaagagatgttttgttgccagaattcgatattcctaaggaatttttaagtgaagaagac
aaaattgatggcggaaaacgtggcgaaaatgcttatttaagacatttaacctatgacgga
gccaagaaaaaatacgaagaaattactgatgagatcagggatcgtttagatttcgaactt
gaagttattgcaaaaaccggatacccaggatattttcttatcgtgcaggatttctgtaac
gaagctcgaaaaatgggtgtttgggtaggtcccggacgtggttctgctgcgggatctgct
gtagcttattgtaccggaatcaccaatgtggatcctattaagtatgatttgctatttgag
cgttttcttaatccggaaaggatttccatgcccgatatcgatatcgatttcgatgatgaa
ggtcgagataaaatcatcaaatgggtggttgaaaaatatggtaaatcgaatgttgcacaa
atcataacttattcgattctcggtgggaaatctgccataaaagatgccggaagagtgctg
gatgtttcgattccggaaaccaataatattgcgaaattagtgccttccacacccggaatg
aatattgcaaaagcactttcgaaattcgacaaattaaacccggaagacaaagtgctcgca
caagaaatgaaagacattttagagaatcccaatgatgaacgatttcaagttctttctgcg
gcacaaagaatggaaggctgcattagaaataccggaattcacgcgtgcggcgtaatcatc
acacccgaagatatttccaatttggttcctattaccattgcagcgaaggatcctgatatt
ttggtttctcagttcgataactcggtggcggaaagtgctggtttgctgaaaatggatttc
ctcggtttgcgaacgcttaccatcatcaaacatgcgatccgattgatcaaacaaaggcat
aatgtcgatattgatccagatttaattcctttggatgaccttaaaacttttcagttgttt
caagaaggtagaaccgtcgggattttccaatatgaaagtccgggaatgcaaaaatacatg
cgcgaattgaagccaacaaagtttgcggatttaattgccatgaacgcactgtatcgtccg
ggtccgattaagtatattccaaacttcatcaaccggaaaaacggacttgaagaaacggtt
tatgatttagatgaaaccaaagaataccttgaggaaacctatggaattaccgtttatcag
gaacaggtaatgcttttgtctcaaaaattggccaattttaccaaaggtgaagcggataca
ttgcgaaaagcgatgggtaaaaagcaaaaagatgttctagataaaatgtatccgaaattt
attgaaggtggagaaaaaaacaacctcgatgtcgataaactcaataaaatttggaaagac
tgggaagcttttgcagaatatgctttcaacaaatcgcactcgacttgttacgcgctaatc
gcctatcataccgcttatcttaaagccaattatccggcagaatatatggcgagtgtgatg
accaataacctgaataacaccaagcaaatcaccatgttcatggaagattgcaaagggata
ggagtcgatgttttgggtccgtcagtgaatgaatcgcagtacgaatttgcggtaaatgat
aaaggtcaaattcgtttcggtttgggcgcgatcaaaggaatcggtgaaggaccgagtgaa
gcgattgtacaggctagaacttcaggaagatttaccaatatttatgattttttcgagaaa
gttccttcatcacaaatcaataaaagagtagtggaaagtttggtgattgccggagctttt
gatgaggtcgatcgctatcatcgtgcacaatattttgacattgatatttccggaagaacc
aatctggaaaggcttttgagatacggacaaagttttcaagatagcaaaaatgaaatcgaa
aattctctttttgcagatttcgccgaagaagtgaaaatcgaaccaccaaaaatcaacccg
gctcccgaatggcaaaatatgcacatgctaaacaaagaaaaggaaattattggattttac
ctttctgcacaccctttggacgaatataaatatcagttcaaattcatgcagggagcactc
agcaaaaaagaaattctggaatctaaaaaagacgacattattgaactcgaaaaagtgatt
gcgccaatcgatatcgctgatgttgccgacgaagacgatggtctggtagatttggagatt
gatattttggacggtgaagaagaaatgttgatggaagatgcacctaaaaaagccgaacca
aaaggaaatttcaactttttaaatttagatgaagtagatgcttttaaagacactgttgcc
aatcagcaacccgatcttttcaataatgataagctcaattggaaagaaaaacaggccatg
aaaaacaatacaccggaatacatggtcgcaggtttggtaaccgaatatgtagtgaaagac
gggaaaaacagcggcgaaaaaatcgcatttattactttggaagattacagcggaagttac
agtttccggttgggagatcgcgattacatgcgacttcgcgacaaaattgacgtacagcgt
tttgtgattttcaaaataaaatttgcggtgttaaacgatggtagagttttcgtcaacgtg
agtgaagtgatcgatttaaaagattcttttgaaaaatttgctaagaaaatgaccatcgtc
atcgatattaatgatttaaggagagaagatattatattcttcaaagagaatttcttagaa
aatgaaggcgaacaaaaactcaatttcctggtgaaaaaccctgaagatcaatccaatatt
gagctgatggcgatgcgatcgcaagttaatatcaatggtgatttgctggaagtgattcat
aaccttcacaaatatgatgttttcttaaactag
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