Kaistella haifensis: EG338_10360
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Entry
EG338_10360 CDS
T07805
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
khi
Kaistella haifensis
Pathway
khi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
khi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EG338_10360 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
khi03019
]
EG338_10360 (recQ)
03400 DNA repair and recombination proteins [BR:
khi03400
]
EG338_10360 (recQ)
Enzymes [BR:
khi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG338_10360 (recQ)
Messenger RNA biogenesis [BR:
khi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EG338_10360 (recQ)
DNA repair and recombination proteins [BR:
khi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EG338_10360 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AZB22438
LinkDB
All DBs
Position
2166241..2168445
Genome browser
AA seq
734 aa
AA seq
DB search
MKTNTADLSKELKKYFGFSTFKGQQEEIIKNLLEGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAINGLSSDEGVAHVLNSSLNKTQTKQVFDDIKAGKTKLLYVA
PESLIKEDYLEFLKDITISFVAIDEAHCISEWGHDFRPEYRNLKLIIDKIADVPVIALTA
TATPKVQDDIQKTLGMSNALVFKESFNRPNLFYEVRPKVNIDREIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKTRVANQDKFLMEEADVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGICLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGEQFDPVNGAGANMCDNSVNPPKLKDATKELKLV
LTLVKELEEKFRTKDLITVIVGKENPVTKSYKLETTKHFGIGKNEPENFWKSVIRQATVQ
NFLQKDIESYGVLKLTEKGLQVISGKDKNPFLIAEDREYDLAQTKADSDQVQVQQNGGLD
EVLFSQLKELRKKVAKKQGIPPYTVFMDPSLEDMTVQYPISIEEIAKIYGVGDGKAKKFG
KEFAEFIKQYVEENNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIAKAKNLSMDE
LLKEMERIVYQGTKLNIDYYVDENFDEDIVEEFMEFMGESESDSMKVLLAEFGDDLSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaatactgccgatttatcgaaggaacttaaaaaatatttcggcttttctaca
tttaaaggccaacaagaagaaatcattaaaaatcttttggaaggaaaagacatctttgtc
ttaatgccgacaggaggcggtaaatcgctttgctaccaacttccagctctgatttctgaa
ggaacagcaattgtggtttcgccattaattgcattaatgaaaaatcaggtcgatgcgatc
aacgggctatcttccgatgaaggtgtcgctcatgttttgaattcttcattaaataaaacg
caaaccaagcaggtcttcgacgatatcaaagccggaaaaaccaaattgctttatgtggct
cccgaatctcttattaaagaagattatttggagtttttgaaagatattaccatttctttc
gttgcgatcgatgaggcgcattgtatttcggagtggggacacgatttccgtccggaatac
cgaaatctaaaacttattatcgacaaaattgctgatgttcccgtgattgcacttaccgca
accgcgactccaaaagttcaggatgatatccagaaaaccttgggaatgtcgaatgcattg
gtgttcaaagaaagttttaacaggccgaatcttttttatgaagttcgcccgaaagtgaat
attgaccgagaaattgtaaaattcatcaaccaacataaaggaaaatccggaattgtctat
tgcttgagcagaagaaaagtggaagaatttgcccagcttcttcaggtgaatggcatcaat
gcgcttccttaccatgccggtttagaccaaaaaacaagagtggccaaccaagataaattt
ctgatggaagaagccgatgtcatcgtcgcaaccatagcattcgggatgggaatcgacaag
cccgatgtgagatttgtaattcactacgatattcctaaatcattagaaagttattaccaa
gaaaccggtagggcagggcgcgacggtggagaagggatttgcttagcgttttacgatcca
aaagatattgaaaaattggagaaatttttggcgcagaaacctgtttcggaacgtgaaatt
ggtctgcagttgctgaacgaggtagtaggttatgccgaaacttccatgagccgcagacag
tacattctctattatttcggcgagcaatttgatccagtgaacggtgcaggtgcgaacatg
tgcgataattccgtgaaccctccgaaactgaaagatgcaaccaaagaattgaaactggtt
ttaactttagtgaaagaattggaagaaaaattccgcacaaaagatcttattacggtgatt
gttggcaaagaaaatccggtaacaaaatcttataaattagaaaccactaaacattttggt
attggcaaaaatgagccggaaaacttttggaaatcggtgattcgacaagctacagtacag
aattttttacaaaaagatattgaatcatacggtgttttaaaattaactgaaaaaggtttg
caagtgatttccggaaaagataaaaatccttttctcatcgcagaagaccgtgaatatgat
ttggctcaaacaaaagccgattcggaccaagttcaggtgcaacaaaatggcggtttggat
gaagtacttttcagtcaactgaaagaacttcgcaagaaggtcgctaaaaagcaaggaatt
ccgccgtacacagtttttatggatccaagtttggaagatatgactgtccaatacccgatc
agtattgaagaaattgcaaaaatttatggtgttggagatggaaaagccaagaaatttggg
aaagaatttgctgaattcattaagcaatatgtagaagaaaacaatattgaaaggactcaa
gatatggtgctgaaacaagtggccaataaatctagtcacaaggtgttcatcattcaaagt
accgacaaaaaaattgaccttgaagacatagccaaagcaaaaaatctttcgatggacgaa
ctgctaaaggaaatggaacgaattgtatatcaaggaactaaattgaatattgattattat
gttgatgagaattttgatgaagatatcgttgaggaattcatggaatttatgggagaaagt
gaaagcgacagcatgaaagttcttctagcagaattcggggatgatcttagcgatgaagag
gtgagaatgcttcgtattaaatttatttcggatgtagctaactaa
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