Kaistella haifensis: EG338_11795
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Entry
EG338_11795 CDS
T07805
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
khi
Kaistella haifensis
Pathway
khi03420
Nucleotide excision repair
khi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
khi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EG338_11795
03430 Mismatch repair
EG338_11795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
khi03400
]
EG338_11795
Enzymes [BR:
khi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG338_11795
DNA repair and recombination proteins [BR:
khi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EG338_11795
MMR (mismatch excision repair)
Other MMR factors
EG338_11795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DNA_Packaging_2
DEAD
EAD8
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZB22684
LinkDB
All DBs
Position
complement(2469493..2471820)
Genome browser
AA seq
775 aa
AA seq
DB search
MDYLKGLNEAQYQAVTTLEGPLMVLAGAGSGKTRVLTMRIAHLITNLVDPFNILALTFTN
KAAKEMKERIGKVVGQSEAKSLWMGTFHSVFARILRSEAHLLGYPSNFTIYDSQDSLNVI
RKVLKDNNIDADLYKPKKVQSRISNYKNNLITVKAYFGNPELIENDERANMKHMGLIYQK
YVEACFKNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVNAANVV
ISKNVQQFKKNVFSENEEGDKIKVYRALSDADEASFVASNIWEKHNSEQRKFTDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIAYLRILINENDNEALSRIINYPT
RGIGETTQNKLVVFADSQNVSVSSVLDNLGIYAPQLGLNNGILTKLSDFWSMIKAFQVML
KTENAYNVAMEVAKRSGLIKFLKDDQTPEGISRVENIQELMNSMQGFIEEQQQIEDGDPS
LSNFLENIALSADTQTDKDEQGDQVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSSTR
EELEEERRLFYVALTRAEKQAYFSYAVSRFQWGKITDAEPSRFLSEMDAQHLEFINPVAE
TRFINRSGLKSSIFDDEPAEPRFFKKKEEKKSIQRSEPLPVSQKLKPVATARITNPSGAS
SENIEVGDQVRHDRFGVGEVLFLDGTDPDNIKAKVKFQHEGEKNLILKFAKLTKI
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggattatttgaaaggtttaaatgaagcacaatatcaagccgtaaccaccctggaaggt
ccgctaatggtactcgcaggcgcaggttccggcaaaacccgtgtactcaccatgcggatc
gcccatttaatcaccaatctcgttgatccatttaatattcttgcgcttacctttaccaac
aaagcagctaaagaaatgaaagagcgtattggaaaagtggtcggacaaagtgaagcgaaa
tctctttggatgggaactttccactcggtttttgcaaggattcttagaagtgaagcgcac
ttattgggttatccgtcaaattttacgatttacgattctcaagattcgctaaatgtcatc
agaaaagtgttgaaagataacaatatcgatgcggatttatacaaaccgaaaaaagttcag
tcccgaatttccaattacaaaaacaatctcatcacggtgaaagcgtatttcggaaatccc
gaactcatcgaaaatgatgaacgtgcgaacatgaaacatatgggattgatttatcaaaaa
tatgtggaagcttgttttaaaaacggtgcgatggattttgatgatttgctcttaagaaca
aacgagttactcaccagatttccggaagttttggcgaaatatcaggatcgtttccggtac
attttggtcgatgagtatcaggataccaaccattcgcaatatttaattgtaaaagctttg
gcttcaaaatttgaaaatatttgtgtggtaggtgatgatgcacaatcgatttactcattc
cgaggtgcgaatatttataatattttaaactttaaaaaagattatccggacgcggttacg
gtttcgctggaacaaaattaccgatccacgcaaaatattgtaaatgctgctaatgtggtg
atttctaaaaacgttcagcagtttaagaaaaatgtattcagtgagaacgaagaaggagat
aaaattaaagtttatcgtgctctttctgatgcggacgaagcaagttttgtggcttcgaat
atttgggaaaaacacaattccgagcaaagaaaatttaccgattttgcgatattgtaccgt
accaattctcaaactcgtgctttcgaagatgcgttgagaagaaaaaatattccttataaa
gtatacggtggactttccttttatcaaagaaaagaagtaaaggatttaattgcctatcta
cgaattttgattaatgaaaatgataatgaagcgctttccagaatcatcaattatccgact
cgtggaatcggtgaaactactcagaataaattagtggtttttgcggattcgcagaatgtt
tctgtgtcttcagttttggataatttaggaatttatgccccacaattgggattaaacaac
ggaattttaaccaaactttccgatttttggtcgatgataaaagcttttcaagtaatgctg
aaaaccgaaaatgcttataatgtagcgatggaagttgctaaacgaagtggtttgattaaa
tttttgaaagacgatcaaacacccgaaggaatttcacgagtggaaaatattcaggaattg
atgaactccatgcagggtttcatcgaagagcaacaacaaattgaagatggtgatccatca
ttatccaatttcctagaaaacatcgcgctttcagctgatacacaaaccgataaagacgaa
caaggagaccaggtatcgctgatgacgattcacctttccaaaggtttggaatttccagtg
gtgcaccttgttggtttggaagaaaatcttttcccaagtttcatgagttcatcgactagg
gaagagcttgaagaggagcgaagattgttttatgtggctttaacgagagctgaaaaacag
gcttatttcagttatgcagtttccagatttcaatggggaaaaattaccgatgcagaacct
tcgcggtttttaagcgagatggatgctcagcatttggaatttataaatcctgttgcagaa
actcgttttatcaatcgttccggcttaaagtccagtatttttgatgatgaacctgccgaa
ccaagatttttcaaaaagaaagaagaaaagaaaagtattcaaagaagtgaacccttgcca
gtttcacaaaaattaaaaccggttgccactgctagaattaccaatcctagcggagcttct
tcagaaaatattgaagttggtgatcaagttcggcatgaccgttttggagtgggagaagtg
cttttccttgatggaaccgaccctgataatataaaagcgaaagtaaaattccagcatgaa
ggcgagaaaaatctgattcttaagtttgcaaaattgacaaagatctaa
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