KEGG   Kaistella haifensis: EG338_12810
Entry
EG338_12810       CDS       T07805                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
khi  Kaistella haifensis
Pathway
khi03030  DNA replication
khi03430  Mismatch repair
khi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:khi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EG338_12810
   03430 Mismatch repair
    EG338_12810
   03440 Homologous recombination
    EG338_12810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:khi03032]
    EG338_12810
   03400 DNA repair and recombination proteins [BR:khi03400]
    EG338_12810
Enzymes [BR:khi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EG338_12810
DNA replication proteins [BR:khi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EG338_12810
DNA repair and recombination proteins [BR:khi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EG338_12810
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 YNR034W-A-like
Other DBs
NCBI-ProteinID: AZB22859
LinkDB
Position
2688438..2689202
AA seq 254 aa
MNLKLYKPLCVFDLETTGINVAKDRIVEICILKVNPDASRESKTWLVNPEMFIPKESTAV
HGITDEDVKNAPKFKEIAPKIMEMIAGSDLGGFNSNRFDVPLLAEELLRAEIDFDLNKFK
LVDAQTIFHKMEPRNLTAAYKFYCNKELENAHSAEADVLATFEVLDAQVAHYEELPNDIA
ALSEFSFHTKFADLAGMIHFDEEHQEIFAFGKYKGQRVKDVFQKDLGYYGWIQSADFPLY
TKKILTGIQLRSKF
NT seq 765 nt   +upstreamnt  +downstreamnt
atgaatttaaaactctataaaccgctctgcgtcttcgatctggaaaccaccggaatcaat
gtagcaaaagaccgaatcgtggaaatctgtatcctgaaagtaaatccggacgcttcccga
gaaagcaaaacgtggctagtaaatccagaaatgttcatcccgaaagaatctactgcagtg
cacggaattacagatgaagatgtgaaaaacgctccaaaatttaaagaaatcgctccaaaa
attatggaaatgatcgccggttcggatttgggcggcttcaattccaacagatttgacgtt
ccacttttggctgaagaacttctgagggccgagatcgatttcgatttaaacaaattcaaa
ttagttgatgcgcaaacgattttccacaaaatggagccaagaaatttgacggcagcttac
aaattctactgcaataaagagttggaaaacgcccattctgctgaagctgatgttttagca
actttcgaagtattggatgcgcaagttgctcactacgaagaacttccaaacgatattgct
gcactaagcgagttttcttttcacaccaaatttgcagatttagcgggaatgattcatttt
gatgaagaacatcaagagattttcgcgttcgggaaatacaaaggacaacgcgtgaaagac
gttttccaaaaggatttgggctattacggctggattcaaagcgctgattttccgttatat
actaagaaaattttgacaggaattcaacttcgttcgaaattttaa

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