Roseateles sp. DAIF2: G8A07_03885
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Entry
G8A07_03885 CDS
T06904
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kia
Roseateles sp. DAIF2
Pathway
kia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G8A07_03885 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kia03021
]
G8A07_03885 (rpoC)
03400 DNA repair and recombination proteins [BR:
kia03400
]
G8A07_03885 (rpoC)
Enzymes [BR:
kia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G8A07_03885 (rpoC)
Transcription machinery [BR:
kia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G8A07_03885 (rpoC)
DNA repair and recombination proteins [BR:
kia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G8A07_03885 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QPF72151
UniProt:
A0A7S9GH59
LinkDB
All DBs
Position
826459..830679
Genome browser
AA seq
1406 aa
AA seq
DB search
MKGLLDLFKQFTPDEHFDAIAIRLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVVDPGMTPLKKFSIMTEDDYDAKRVEFGDEFVALM
GAEGIKKLLEEMDLDIEIDRLRNDMTGSELKVKKNSKRLKVMEAFKKSGIKPNWMVMDVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLARLLELKAPEIIVRNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVL
LNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYYATRERTNGKGEGLVFSDVAEIIRALENGVV
EITAKISVRLTEYTKNKETGEWIPETKLVDTTVGRALLSEILPKGLPFSNINKALKKKEI
SRLINTSFRKCGLKETVVLADKLLQSGFKLATRAGISIAVDDMLVPKQKYELIERAEKEV
KEIEQQYVSGLVTAGERYNKVVDIWGKTGDEVGKVMMAQLAKQKVIDRNGKEVDQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTESDCGTDNGMAMRALVEGGEVIESLRDRVLG
RVTAIDVLHPETQAVLMPAGDMLDEDILDVLEQAGVDEIKVRTPLTCATRFGLCAKCYGR
DLGRGGLVNTGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSDGIIGFN
ATMRYVTNGKGELVVISRSGEIIIADPHGRERERHKVPYGAILNIKADQTIKAGLILANW
DPLTRPIITEFAGQAKFENVEEGVTVAKQVDEVTGLSTLVVIDPKRRGAAKVIRPQVKLL
DANGNEVKIPGTDHSVTIGFQVGALIQVRDGQDLAPGEVLARIPVEGQKTRDITGGLPRV
AELFEARSPKDVGVLAEQTGTVSFGKETKGKVRLEITDPDGKKHEVLVPKEKNILVHEGQ
VVNRGELIVDGAADPQDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVQITNPGDTHYILNEQVERSELLDTNDRMRKEGKMIATHADVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAFHDARRAKEAMDDAERRA
IAMQEAEELAAAQMAGVDAPAEGSAE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtttgctggacctgttcaagcaattcacgccggacgagcatttcgatgcgatc
gcgatccgtctggcatcgcccgagaagatccgttcgtggtccttcggcgaggtgaagaag
cccgagaccatcaactaccggactttcaagcccgagcgtgatggcctgttctgcgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacccagaccaaggtccgtcgtgac
cgcatgggccacatcgacctggccgcgccctgtgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcctggtgctcgacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctatgtcgtggtcgatcccggcatgaccccgctgaagaagttctcgatcatg
accgaggacgactacgacgcgaagcgcgtcgagttcggtgacgagttcgtcgcgctgatg
ggcgccgagggcatcaagaagctgctggaggagatggatctcgacatcgagatcgatcgc
ctgcgcaacgacatgaccggctccgagctgaaggtcaagaagaactccaagcgcctgaag
gtcatggaggccttcaagaagtccggcatcaagccgaactggatggtgatggacgtgctg
ccggtgctgccgccggacctgcgtccgctggtgccgctggacggcggccgcttcgcgacc
tccgacctgaacgacctctatcgtcgcgtcatcaaccgcaacaaccgtctggctcgcctg
ctggaactgaaggcccccgagatcatcgtgcgcaacgaaaagcgcatgctgcaggaagcc
gtcgactcgctgctggacaacggccgccgcggcaaggccatgaccggcgcgaacaagcgc
gcgctgaagtccctggccgacatgatcaagggcaagagcggtcgcttccgtcagaacttg
ctgggcaagcgtgtcgactactcgggccgttcggtcatcgtggtgggcccgaccctgaag
ctgcatcagtgcggtctgcccaagctgatggcgctggagctgttcaagcccttcatcttc
tcgcgcctggaggcgatgggcatcgccaccaccatcaaggccgcgaagaaggaagtcgag
tccggcaccccggtggtctgggacatcctggaagaggtcatcaaggagcacccggttctg
ctgaaccgcgcaccgacgctgcaccgtctgggcatccaggccttcgagcccgtgctgatc
gaaggcaaggcgatccagctgcacccgctggtctgcgcggccttcaacgccgacttcgac
ggtgaccagatggccgtccacgtgccgctgtcgatcgaagcgcagatggaagcccgcacc
ctgatgctggcctccaacaacgtgctgttcccggcctccggcgaaccctcgatcgtgccg
tcgcaagacgtggtgctgggtctgtactacgcgacccgcgaacgcaccaacggcaagggc
gaaggcctggtgttctccgatgtggccgagatcatccgcgcgctggaaaacggcgtggtg
gaaatcaccgccaagatcagcgtgcgcctgaccgagtacaccaagaacaaggaaacgggc
gagtggatccccgagaccaagttggtggacacgaccgtcggccgtgctttgttgagcgag
atcctgcccaagggcctgccgttctcgaacatcaacaaggcgctgaagaagaaggaaatc
tcgcgcctgatcaacacctcgttccgcaagtgcggcctgaaggaaaccgtggtgctggcc
gacaagctgctgcagagcggtttcaagctcgccacgcgcgccggcatctccatcgcggtg
gacgacatgctggtgcccaagcagaagtacgagctgatcgagcgcgccgagaaggaagtc
aaggagatcgagcagcagtatgtctcgggcctggtgaccgccggcgagcgctacaacaag
gtcgtcgacatctggggcaagaccggtgacgaggtgggcaaggtcatgatggcccagctc
gccaagcagaaggtcatcgaccgcaacggcaaggaagtggatcaggagtccttcaactcc
atctacatgatggccgactccggcgcccgcggtagcgcggcccagattcgccagctggcc
ggtatgcggggcctgatggccaagccggacggctcgatcatcgagacgcccatcacggca
aacttccgcgaaggtctgaacgttctgcagtacttcatctccacccacggtgcccgtaag
ggcctggcggatacggcgctgaagaccgcgaactcgggctacctgacccgtcgtctggtc
gacgtgacccaggatctggtcgtcaccgagagcgattgcggcaccgacaacggcatggcc
atgcgcgccctggtcgaaggcggtgaagtgatcgaatcgctgcgcgaccgcgtgctgggc
cgtgtcaccgcgatcgacgtgctgcatccggaaacccaggcggtgctgatgccggccggc
gacatgctggacgaggacatcctggacgtgctggaacaggccggcgtggacgagatcaag
gtccgcaccccgctgacctgcgccacccgcttcggcctgtgcgccaagtgctatggccgc
gatctgggtcgtggcggtctggtcaacaccggtgaggccgtgggcgtgatcgccgcgcag
tcgatcggtgagccgggcacgcagctgacgatgcgtaccttccacatcggtggtgccgcc
tcgcgtgctgccgtggcctccagcgtcgaagccaagtcggacggcatcatcggcttcaac
gccacgatgcgctacgtcacgaacggcaagggcgagctggtggtgatttcgcgttccggc
gaaatcatcattgccgacccgcatggccgcgagcgcgagcgtcacaaggtgccgtacggc
gcgatcctgaacatcaaggccgaccagaccatcaaggccggtctgatcctggcgaactgg
gatccgctgacccgcccgatcattaccgagttcgccggtcaggcgaagttcgagaacgtc
gaggaaggcgtcaccgtcgccaagcaggtggacgaggtgaccggtctgtcgaccctggtc
gtgatcgatccgaagcgccgcggcgctgccaaggtcattcgcccgcaggtcaagctgctg
gatgccaacggcaacgaggtgaagatccccggcaccgaccactcggtgacgatcggcttc
caggtcggcgcactgatccaggtgcgtgacggccaggatctggcccccggcgaggtgctg
gcgcgtattccggtcgaaggccagaagacccgcgacattaccggcggtctgccgcgcgtg
gccgagctgttcgaagcccgttcgcccaaggatgtgggcgtgctggccgagcagaccggt
acggtctccttcggcaaggaaaccaagggcaaggtgcgactggagatcaccgatccggac
ggcaagaagcacgaagtgctggtgcccaaggagaagaacatcctggtgcacgaaggccag
gtggtgaaccgcggcgagctgatcgtcgacggcgcggcggatccgcaggacatcctgcgc
ctgctgggcatcgaggaattggcgcgctacatcgtcgacgaagttcaggacgtgtaccgt
ctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgc
cgcgtgcagatcaccaaccccggcgacacgcactacatcctgaacgagcaggtcgagcgt
tcggagctgctggataccaatgaccgcatgcgcaaggaaggcaagatgattgccacccat
gccgacgtgctgctgggtatcaccaaggcttcgctgtcgaccgactccttcatctccgcg
gcttccttccaggaaaccacccgcgtgctgaccgaggctgccatcatgggcaagcgtgac
gagctgcgcggtctgaaggagaacgtgatcgtcggccgcctgatccccgccggtaccggc
atggccttccacgacgcccgtcgtgccaaggaagcgatggacgacgccgagcgccgcgcc
attgcgatgcaggaggccgaggagctggccgccgcccagatggctggcgtcgacgcgccg
gccgagggctcggcggagtaa
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