Roseateles sp. DAIF2: G8A07_06440
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Entry
G8A07_06440 CDS
T06904
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kia
Roseateles sp. DAIF2
Brite
KEGG Orthology (KO) [BR:
kia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kia03016
]
G8A07_06440
Enzymes [BR:
kia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
G8A07_06440
Transfer RNA biogenesis [BR:
kia03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G8A07_06440
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Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
QPF72602
UniProt:
A0A7S9C557
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All DBs
Position
complement(1371807..1373852)
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AA seq
681 aa
AA seq
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MFALFDDAGKFLAGRVMSEAESSLQIELESGKRVKVKAANVLLKFDKPAPAELIAEGQRL
AQEIDLDLAWEFAPETEFGFAELARDYFDAKAGLTHQAAALFRLFEAPHYFRRAGKGQFK
KAPEEIVKAALLGIERKRQQALQIEAWAEELARGECPAAIKEQIYKILFKPDKNGPEYKA
VVEATKRAQKAPLELLQGAGAIGSPYQFHWKRFLFENFPKGTGFPALTAPEIKDELPLAA
VAAFSIDDSATTEIDDALSVQGLGSGTVTFGVHIAAPGLAIQPDSAVDKVARERYSTVYM
PGWKLTMLPDEVVQTYTLIEGRDCPAVSIYFTLDEATLEIKASETKLERVPIKSNLRHDK
LDAVITEASLTGAAPADYAFAAELAFCHRLARDLKAKREVVRGKPETFNRPDYNFRLDNG
GGTQEPDGSEQVSITTRQRGSALDLIVAEAMILANSTWGGWLHSLGLPGIYRSQASLAPG
VKVRMGTKAQPHAGMGVAQYTWATSPLRRYVDLVNQWQIIACARHGRTAALVAPFKPKDA
QLFSIISGFDAAYSAYNGFQNGIERFWTLRYLQQQGITELDAAVMKEGLVRADTLPLVFK
ALGCESLPRGAHVKVRITGIDEMTLDLHASLVARLDDQPVAAAEATEEDEEEEPTGALTL
AIDLSPEGEAGGTPAADAPQA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccctgttcgatgacgccgggaagttcctcgccggccgtgtgatgtccgaagcc
gaaagctcgctgcagatcgagctggagtcgggcaagcgcgtcaaagtgaaggcggccaat
gtgctgctgaagttcgacaagcccgcgcccgccgagctgatcgcggagggccagcgcctg
gcccaggagatcgacctggacctggcctgggagttcgcccccgagaccgagttcggtttc
gccgagctggcgcgcgactatttcgacgccaaggccggcctgacgcatcaggcggccgcg
ctgttccgcctgttcgaggcgccgcattacttccgccgcgccggcaagggccagttcaag
aaggcgccggaggagatcgtcaaggccgcgctgctgggcatcgagcgcaagcgccagcag
gcgctgcagatcgaggcctgggccgaggaactggcccggggcgaatgcccggccgcgatc
aaggagcagatctacaagatcctgttcaagccggacaagaacggccccgagtacaaggcc
gtggtcgaggcgaccaagcgcgcgcagaaggcgccgctggagctgctgcagggcgccggc
gcgatcggcagcccctaccagttccactggaagcgcttcctgttcgagaacttccccaag
ggcaccggcttccccgcgctgaccgcgccggagatcaaggacgagctgccgctggccgcg
gtggccgccttctcgatcgacgattcggccacgaccgagatcgacgatgcgttgtcggtg
cagggcctgggttcgggcaccgtcaccttcggcgtgcatatcgccgcgccgggcctcgcg
atccagccggactcggccgtcgacaaggtcgcgcgcgagcgctattccaccgtctacatg
ccgggctggaagctgaccatgctgccggacgaggtggtgcagacctacacgctgatcgag
ggccgcgactgcccggccgtgtcgatctacttcacgctcgacgaggccacgctggagatc
aaggccagcgagacgaaactggagcgcgtgccgatcaagagcaatctgcgccacgacaag
ctggacgcggtgatcaccgaggcctcgctgaccggcgcggcgccggccgactatgccttc
gccgccgagctggccttctgccaccgcctggcccgcgacctgaaggccaagcgcgaggtg
gtgcgcggcaagcccgagaccttcaaccggcctgactacaacttccgcctcgacaacgga
ggcggcacgcaggagccggacggcagcgagcaggtcagcatcacgacgcgccagcgcggc
tcggcgctggacctgatcgtcgccgaggcgatgatcctggccaactcgacctggggcggc
tggctgcacagcctgggcctgcccggcatctaccgcagccaggccagcctggcgccgggc
gtcaaggtgcgcatgggcaccaaggcccagccgcatgccggcatgggcgtggcgcaatac
acctgggccacctcgccgctgcgccgctatgtggacctggtgaaccagtggcagatcatc
gcctgcgcgcgccatggccgcaccgcggcgctggtggcgccgttcaagcccaaggacgcg
cagctgttctcgatcatctccggcttcgacgccgcctactcggcctacaacggcttccag
aacggcatcgagcgcttctggaccctacgctatctgcagcagcagggcatcaccgagctg
gatgccgcggtgatgaaggagggcctggtgcgcgccgacaccctcccgctggtgttcaag
gccctgggctgcgagagcctgccgcgcggcgcgcatgtaaaagtgcgcatcaccggcatc
gacgagatgaccctggacctgcacgccagcctggtcgcccgcctggatgaccagccggtg
gccgccgccgaggcaacggaagaggacgaggaggaggagccgaccggcgccctcaccctg
gccatcgatctgtcgcccgagggcgaggccggcggcacgcccgccgccgacgcgccgcag
gcctga
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