Roseateles sp. DAIF2: G8A07_08570
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Entry
G8A07_08570 CDS
T06904
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kia
Roseateles sp. DAIF2
Pathway
kia03410
Base excision repair
kia03430
Mismatch repair
kia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G8A07_08570 (recJ)
03430 Mismatch repair
G8A07_08570 (recJ)
03440 Homologous recombination
G8A07_08570 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kia03400
]
G8A07_08570 (recJ)
DNA repair and recombination proteins [BR:
kia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G8A07_08570 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G8A07_08570 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G8A07_08570 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Herpes_U59
Motif
Other DBs
NCBI-ProteinID:
QPF76510
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Position
complement(1825230..1827038)
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AA seq
602 aa
AA seq
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MTPQILTRDVPPRASWALEQAGIPPLLARLFAARGVRSAEELDDGLALLIPPEGLKGMAE
AAALLADAIQQGSRICIVADYDCDGATACSVALRGLGLLGARPGTLHYVVPDRAVHGYGL
TPAIVELALPLKPDLLMTVDNGIASLAGVAHAQALGLKVLVTDHHLPAVVDGAEVVPAAD
AIVNPNQPGCTFESKNLAGVGVAFYTLLALRGELRRRGVFDAEAAPGRSQAASPPLGGGG
PRPQPRLDTLLDLVALGTVADVVRLDPNNRRLVAQGLRRMRAGRMQPGVAALFSAAGRDA
ARANSFDLGFALGPRINAAGRLSDMTLGIECLTTDDPARALELARQLDAINRERREIEAG
MRELAELKLDELMQDPALQGEAPPALCLYEPEFHEGVVGIVAGRVKDRLHRPTFVFALGA
DGQVKGSGRSIPGFHLRDALDLVSKREPSLLKKFGGHAMAAGCTLTAEDPESAEACVRAF
GAALQQVAREWLDAAALTRTLKTDGPLPAEAFTPDIVLQLEAQVWGQAFEAPLFCDEVQV
VSQRIVGERHLKLRVKQAGQLRDAIWFGHVDPVPEQGRLAYRLALDEYQGQQRVQMIVEA
MS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atcaccccgcagatcctgacccgcgacgtgccgccgcgtgccagctgggcgctggagcag
gccggcatcccgccgctgctggcacgcctgttcgccgcgcgcggcgtgcgcagtgccgag
gagctggacgacggcctggcccttctgatcccgcccgagggcctgaagggcatggccgag
gccgccgcgctgctggccgacgcgatccagcagggctcgcgcatctgcatcgtcgccgac
tacgactgcgacggcgccaccgcctgcagcgtcgcgttgcgcggcctgggcctgctgggg
gcaagacccggcaccctgcactatgtggtgccggaccgcgcggtgcatggctacggcctg
accccggcgatcgtcgagctggccctgccgctgaagccggacctgctgatgacggtggac
aacggcatcgccagcctggccggcgtggcccatgcccaggccctgggactgaaggtgctg
gtgaccgaccaccacctgccggccgtggtcgacggcgccgaggtcgtgcccgcggccgat
gcgatcgtcaacccgaaccagccgggctgtaccttcgagagcaagaacctggccggcgtc
ggcgtggccttctacaccctgctggcgctgcgcggcgagctgcgccggcgcggggtcttc
gatgccgaggccgcgccgggccgctcccaagcggcctcgccccccttggggggtgggggg
ccccgtcctcaaccgcggctggacaccttgctggacctggttgcgctgggcacggtggcc
gacgtggtgcggctcgatcccaacaaccgccgcctggtggcccagggcctgcgccgcatg
cgcgccggccgcatgcagccgggcgtggccgcgctgttctcggccgccggccgcgacgcg
gcgcgcgccaacagcttcgacctcggcttcgcgctggggccgcgcatcaacgcggccggc
cggctctcggacatgaccctgggcatcgaatgcctgacgaccgacgatccggcacgcgcg
ctggagctggcacgccagctcgatgcgatcaaccgcgagcgccgcgagatcgaggccggc
atgcgcgagctggccgagctgaagctcgacgagctgatgcaggacccggccctgcagggc
gaggcgccgccggcgctgtgcctgtacgagccggagttccacgagggcgtggtgggcatc
gtcgcgggccgagtcaaggaccggctgcaccgccccaccttcgtgttcgcgctgggcgcc
gacgggcaggtcaagggctcgggccgctcgatcccgggctttcatctgcgtgacgcgctg
gacctggtctccaagcgcgaacccagcttgctgaagaagttcggcggccatgcgatggcg
gccggctgcaccctgaccgccgaggatcccgagagcgccgaggcctgcgtgcgggccttc
ggcgccgcgctgcagcaggtggcgcgcgaatggctggacgccgccgcgctgactcgcacg
ctgaagacagatggcccgctgccggccgaggccttcacgccggacatcgtgctgcagctg
gaggcccaggtctggggccaggccttcgaggcaccgctgttctgcgacgaggtgcaggtg
gtgtcacagcgcatcgtcggcgaacgccatctgaagctgcgcgtcaaacaggccgggcag
ctgcgcgacgcgatctggttcggccatgtcgacccggtacccgagcagggtcggctggcc
taccggctggcgctggacgaataccagggccagcagcgggtgcagatgatcgtcgaggcg
atgagttag
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