Roseateles sp. DAIF2: G8A07_10270
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Entry
G8A07_10270 CDS
T06904
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kia
Roseateles sp. DAIF2
Brite
KEGG Orthology (KO) [BR:
kia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kia03016
]
G8A07_10270
Enzymes [BR:
kia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
G8A07_10270
Transfer RNA biogenesis [BR:
kia03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
G8A07_10270
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
CPDase
Motif
Other DBs
NCBI-ProteinID:
QPF73260
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All DBs
Position
2211542..2212138
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AA seq
198 aa
AA seq
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MPQAHDPSAARPDHRLFFALCPDTATALKLSALATRLKNELGLKGRPHALERFHVTLHHL
GDFVGMPIELRERAEAAADGLRFEPVALRFDQLLSFTRKDRNRPLVLGGGAGLDGVRELQ
RALGAALAAGGVPLERGSFTPHLTLMYDDAAVPRQDIAPIGWTAGELVLVDSLLGQSRHL
RLRSWPLTQDEKRKDAQA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccccaggcccacgacccttcagcagcgcgccccgaccaccgcctgttcttcgcgctc
tgtcccgacacggccaccgcgctgaagttgtcggcgctggccacccggctgaagaacgag
ctgggcttgaaggggcggccgcatgcgctcgagcgcttccatgtcacgctgcaccatctg
ggcgatttcgtcggcatgcccatcgagctgcgcgagcgggccgaggccgccgccgacggc
ctgcgctttgagccggtggcgctgcgcttcgaccagctgctgagcttcacccgcaaggac
cgcaatcgcccgctggtgctgggcggcggggcgggcctggacggagtgcgggaactgcag
cgcgcgctcggcgccgcgctggccgcgggcggcgtgccgctggagcgcgggagcttcacg
ccgcacctgaccctgatgtacgacgatgcggcggtgccgcgccaggacatcgcgcccatc
ggctggaccgccggcgagttggtgctggtcgacagcctgctgggccagagtcggcacctg
cggctgcgcagctggccgctgacgcaagacgaaaaaagaaaggacgcccaagcatga
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