Roseateles sp. DAIF2: G8A07_12425
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Entry
G8A07_12425 CDS
T06904
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kia
Roseateles sp. DAIF2
Pathway
kia03030
DNA replication
kia03430
Mismatch repair
kia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G8A07_12425 (dnaE)
03430 Mismatch repair
G8A07_12425 (dnaE)
03440 Homologous recombination
G8A07_12425 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kia03032
]
G8A07_12425 (dnaE)
03400 DNA repair and recombination proteins [BR:
kia03400
]
G8A07_12425 (dnaE)
Enzymes [BR:
kia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G8A07_12425 (dnaE)
DNA replication proteins [BR:
kia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G8A07_12425 (dnaE)
DNA repair and recombination proteins [BR:
kia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G8A07_12425 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QPF73651
LinkDB
All DBs
Position
2696892..2700410
Genome browser
AA seq
1172 aa
AA seq
DB search
MAFVHLRTHTEFSVVDGTLRTDDAAKAAAKDGQVALGLTDLANLFGGVKFYNACRKSGVK
PILGADCWLEPEASDKSSTRLLLLVQNIQGYLNLSELLSRAWIQNVVRNQACVKWEWLEE
LGEGLICLSGAQFGGLGQALLMGDQAKARDWAQRLAAIFPGRFYIELQRAGLPGQEALVR
ASVPLAAELQLPVVATHPIQFLAEEDYDAHEARVCIADGETLANPKRIKRFLPGQYFRSQ
ADMEALFADIPSAIANTVEIAKRCSLTLVLGKPQLPNFPTPLLEDGSKMPMADYFRKLSF
EGLEDRLKLLYPDPAKREAQRPRYVERLEFELETIIKMGFPGYFLIVGDFIKWAKMNGCP
VGPGRGSGAGSLVAYVLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQGNRDRVIEY
VKDKYGRPAVSQIATFGTMAAKGALRDIGRVLGMGFGHVDSIAKLVPAPPGKTVTLAKLP
PDFDPDKAKMVYARHESPEIEEREREDEEVAGLLGLAARVEGTVRSIGMHAGGVLIAPGK
ITDFCPQYQQPGSTSAVSQYDKDDVEAIGLVKFDFLGLATLTILELAKDFIVARYPEQKD
FAFEKIPLDDKKTYKLFSDGLTESVFQFESSGMQKMLKDAKPSRLEDLIALNALYRPGPM
DLIPTFVARKHGKEVVEYPHPLTEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRR
AMGKKKAEEMAMHREMFRKGAAEKGIDQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYH
TAWLKVHFTAEFFAANMTIESDDTDKLKVLLNDAKLFGIEFEPPNVNLGVHRFEPLGPKR
VNYSLGAVKGTGVGAIQAIVAARNEGGPFKSFFDFCVRVDRKQVNKRVVEALIKAGAFDA
LEPDRARLLASVALGYTYADNLQANANQGGLFDFDDSTHGSSTAEPPLVEVAPWSIKEKL
SLEKTAIGYYLSGHLFDQSGEEVRRMVKRRIAELQDSREPVMVAGIVSDMRVINGNRGRV
AIFKLDDKSDAIEAVANEELLNANKEQLAEDELIIVSGKVQNDRFSGGLRMNIQQIWSLT
AARARFGRYVYLPVKSSLPPLAEVVKTWPARKVESEQGTVSQGLKVQTHHFLAQGQARLD
LGEDSRFWPCDEALQRFAELSPEPARIVYEVE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgttcacctgcgcacccataccgagttttccgtcgtcgacggcaccctgcga
accgacgatgccgccaaggcggcggccaaggacgggcaggtggcgctgggcctgaccgac
ctggccaatctgtttggcggggtgaagttctacaacgcctgccgcaagagcggcgtcaag
cccatcctgggtgccgactgctggctggagccggaggcttcggacaagtcctcgacccgc
ctgctgctgctggtgcagaacatccagggctatctgaacctgagtgagctgctgtcgcgc
gcctggatccagaacgtggtgcgcaaccaggcctgcgtcaaatgggagtggctggaggag
ctgggcgagggcctgatctgcctgtccggcgcgcagttcggcggcctgggccaggccctg
ctgatgggcgaccaggccaaggcgcgcgactgggcgcagcgcctggccgcgatcttcccg
gggcgtttctacatcgaactgcagcgcgccggtctgccgggccaggaggcgctggtgcgg
gccagcgtaccgctggcggccgagctgcagctgccggtggtggcaacgcacccgatccag
ttcctggccgaggaggactacgacgcccatgaggcgcgcgtgtgcatcgccgatggcgag
accctggccaaccccaagcggatcaagcgcttcctgccgggccagtacttccgcagccag
gcggacatggaggcgctgttcgccgacatcccgagcgcgatcgccaacacggtggagatc
gccaagcgctgcagcctgaccctggtgctgggcaagccgcagctgccgaacttcccgacg
ccgctgctggaagacggcagcaagatgccgatggcggactacttccgcaagctctccttc
gagggcctggaggaccggctgaagctgctctacccggacccggccaagcgcgaggcgcag
cgcccgcgctatgtcgagcgcctggagttcgagctggagaccatcatcaagatgggcttc
cccggctacttcctgatcgtgggtgacttcatcaagtgggcgaagatgaacggctgcccg
gtcggcccgggccggggctccggcgccggctcgctggtcgcctatgtgctcctgatcacc
gacctggacccgctgcagtacaacctgctgttcgagcgtttcctgaatcccgaacgcgtc
tcgatgcccgacttcgacatcgacttctgccagggtaatcgcgaccgcgtcatcgagtac
gtcaaggacaagtacggccgccccgcggtgagtcagatcgccaccttcggcacgatggcg
gccaagggcgcgctgcgcgatatcggccgggtgctgggcatgggctttggccatgtggac
tcgatcgccaagctggtgccggcgccgccgggcaagaccgtgaccctggccaagctgccg
ccggacttcgacccggacaaggccaagatggtctacgcccgccacgagtcgcccgagatc
gaggagcgcgagcgcgaggacgaggaggtcgccggcctgctgggcctggcggcgcgcgtc
gagggcacggtgcgctcgatcggcatgcacgccggcggcgtgctgatcgcgcccggcaag
atcaccgatttctgcccccagtatcagcagcccggctcgaccagcgcggtgagccagtac
gacaaggacgacgtggaggcgattggcctggtgaagttcgacttcctgggcctggccacc
ctgaccatcctggagctggccaaggattttatcgttgcgcgctatccggagcagaaggac
ttcgccttcgagaagatcccgctggacgacaagaagacctacaagctgttctccgacggc
ctgacggagtcggtgttccagtttgaatcgagcggcatgcagaagatgctgaaggacgcg
aagccctcgcgtctggaggatctgatcgcgctgaacgcgctgtaccgcccgggtccgatg
gacctgatcccgaccttcgttgcgcgcaagcatggcaaggaggtggtcgagtacccgcat
ccgttgacggagcccgtgctggccgagacctacggcatcatggtctatcaggagcaggtg
atgcagaccgcccaggtgctgggcggctacagcctcggcggcgccgacatgctgcgccgc
gcgatgggcaagaagaaggccgaagagatggccatgcaccgcgagatgttccgcaagggc
gccgcggagaagggcatcgaccaggacaaggccgacgaggtcttcgacctgatggagaag
ttcgcgggctacggcttcaacaagtcgcacgccgccgcctactcgctcttggcctatcac
acggcctggctgaaggtgcatttcacggcggagttcttcgccgcgaacatgaccatcgaa
tcggacgacaccgacaagctcaaggtgctactcaacgatgccaagctgttcggcatcgag
ttcgagccgcccaatgtcaacctgggcgtgcaccgcttcgagccgctgggcccgaagcgc
gtcaactacagcctgggcgcggtcaagggcaccggcgtcggcgcgatccaggcgatcgtc
gcggcacgcaacgagggtgggcccttcaagagcttcttcgatttctgcgtgcgggtggac
cgcaagcaggtgaacaagcgcgtggtcgaggccctgatcaaggccggcgccttcgacgcg
ctggagcccgaccgcgcgcgcctgctggccagcgtggccctgggctatacctatgccgac
aacctgcaggccaacgccaaccagggcggcctgttcgacttcgacgacagcacccatggc
tcctcgaccgcggagccgccgctggtcgaggtggcgccctggagcatcaaggaaaagctc
agcctcgagaagactgcgatcggctactacctcagcggccatctgttcgaccagagcggc
gaggaggtgcgccgcatggtcaagcgccgcatcgctgagctgcaggacagccgtgagccg
gtgatggtggccggcatcgtcagcgacatgcgggtgatcaacggcaaccgcggccgggtc
gcgatcttcaagctcgacgacaagagcgatgcgatcgaggcagtggccaacgaggagctg
ctgaacgccaacaaggaacagctggccgaggacgagctgatcatcgtctcgggcaaggtg
cagaacgatcgcttctccggcggcctgcgcatgaacatccagcagatctggagcctgacg
gcggcgcgcgcgcgcttcggccgctatgtctacctgccggtcaagagcagcttgccgccg
ctggccgaggtcgtgaagacctggccggcgcgcaaggtggaaagcgagcagggcacggtc
agccagggcctgaaggtgcagacccaccatttcctggcccagggccaggccaggctggat
ctcggcgaggacagccgtttctggccctgcgacgaggcgctgcaacgctttgccgagctg
agcccggagcccgcacgcatcgtttacgaggtcgagtaa
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