KEGG   Roseateles sp. DAIF2: G8A07_16130
Entry
G8A07_16130       CDS       T06904                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
kia  Roseateles sp. DAIF2
Pathway
kia03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    G8A07_16130 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kia03400]
    G8A07_16130 (uvrB)
DNA repair and recombination proteins [BR:kia03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G8A07_16130 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      G8A07_16130 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB UVR ResIII DEAD AAA_30 AAA_22 Kinesin EB1_binding AAA_16 DUF87 DALR_1
Other DBs
NCBI-ProteinID: QPF74300
LinkDB
Position
complement(3487491..3489620)
AA seq 709 aa
MQETPNVQPAAVADSEAPKGEFVSFEGSPYELFQPFPPAGDQPTAIAQLCEGINDGLSFQ
TLLGVTGSGKTYTMANVIARLGRPAIIFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDY
YQPEAYVPQRDLFIEKDSAINEQIEQLRLSCTKSLLERRDVVIVASVSAIYGIGNPSDYH
HMVMTLRVGDKMGQRDVIAQLIRMQYTRNEMEFSRGAFRVRGDTIDVFPAEHSELAVRIE
LFDDEVDGLSLFDPLTGQIRQKIPRFTVYPSSHYVTPREKVLEALEGIKAELRERVGQFV
ADGKLVEAQRLEQRTRFDLEMLQEVGHCKGIENYTRHLSGAAPGEPPPTLVDYLPSDALM
FLDESHVLIGQFGGMYNGDRARKTTLVEYGFRLPSAMDNRPLKFAEFERKMRQAVFVSAT
PAQYEKDNAGQVVEQVVRPTGLVDPVVEVRPATHQVDDVLQEIRLRVEANERVLITTLTK
RMAEQLTDYLSDNGVKVRYLHSDVDTVERVEILRDLRLGTFDVLVGINLLREGLDIPEVS
LVAILDADKEGFLRAERSLIQTIGRAARNLNGKAILYGDRITDSMRKAIDETERRRSKQM
AFNEANGITPRGLNKRIKELIEGVYSDKPGRDDSKLMQAAQVEELSEKDLGKRIAQLEKQ
MLEHARNLEFEKAARVRDQLAQLREQAFGAAVHDNIVPIQPEKRPAKRA
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgcaagaaactcctaacgtccaacccgccgccgtggctgacagcgaagcgccgaagggc
gagttcgtctctttcgaaggctcgccctatgagttgttccagcccttcccgccggccggc
gaccagccgaccgcgatcgcccagctgtgcgagggtatcaacgacggcctgagtttccag
accctgctgggcgtaaccggctccggcaagacctacacgatggccaatgtgatcgcccgg
ctgggccggccggccatcatcttcgcgcccaacaagaccctggcggcgcagctctacagc
gagttccgcgagttctttccgaagaacgcggtcgagtatttcgtcagctactacgattac
taccagcccgaggcctatgtgccgcagcgcgatctgttcatcgagaaagatagtgcgatc
aacgaacagatcgagcagctgcgcctgtcctgtaccaagagcctcttggagcggcgcgat
gtggtgatcgtcgcctcggtgtcggcgatctacggtatcggcaacccgagcgactaccac
cacatggtgatgaccctgcgcgtgggcgacaagatgggccagcgcgacgtgatcgcccag
ctgatccgtatgcagtacacccgcaatgagatggagttcagccgcggcgccttccgggta
cgcggcgacaccatcgacgtctttcccgccgagcattcggagctggcggtgcgcatcgag
ctgttcgacgacgaggtcgacggcctgtcgctgttcgacccgctgaccggacagatccgc
cagaagatcccgcgcttcacggtctatcccagcagccactacgtgacgccgcgcgagaag
gtgctggaggcgttggagggcatcaaggccgagctgcgcgagcgggtcggccagttcgtc
gccgacggcaagttggtcgaggcgcagcgcctggagcagcgcacccgcttcgatttggaa
atgctgcaggaggtgggccactgcaagggcatcgagaactacacccggcatctgtcgggt
gccgcgccgggcgagccgccgccgaccctggtcgactacctgcccagcgacgcgctgatg
ttcctggacgagagccatgtgctgatcggccagttcggcggcatgtacaacggcgaccgg
gcgcgcaagaccaccctggtcgagtacggcttccggctgccctcggcgatggacaaccgg
ccgctgaagtttgccgagttcgagcgcaagatgcgccaggcggtgttcgtctcggccacg
ccggcccagtacgagaaggacaacgccggccaggtggtcgagcaggtggtgcggccgacc
ggtctggtcgacccggtggtcgaggtgcggccggccacgcaccaagtggacgatgtgctg
caggagatccggctgcgggtcgaggccaacgagcgggtgctgatcaccacgctgaccaag
cgcatggccgagcagctgaccgactatctgagcgacaacggcgtcaaggtgcgctatctg
cactcggacgtggacacggtcgagcgggtcgagatcctgcgcgacctgcggctgggcacc
ttcgacgtgctggtcggcatcaatctcttgcgcgaaggactggacatccccgaggtctcg
ctggtggcgatcctggacgccgataaggagggcttcctgcgcgccgagcgcagcctgatc
cagaccatcggccgggcggcgcgcaacctgaacggcaaggccatcctctacggcgaccgg
atcaccgactcgatgcgcaaggcgatcgacgagaccgagcgccgccgcagcaagcagatg
gccttcaacgaggccaatggcatcacgccgcgcggcctgaacaagcgcatcaaggagctg
atcgagggtgtctactccgacaagccgggccgcgacgacagcaagctgatgcaggccgcc
caggtggaggagttgtccgagaaggacctcggcaagcgcatcgcccagctggaaaagcag
atgctggagcatgcccgcaacctggagttcgagaaggctgcgcgggtgcgcgaccaactg
gcccaactgcgcgagcaggccttcggcgccgcggtgcacgacaatatcgtgcccatccag
ccggaaaaacgtccggccaagcgcgcctga

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