Roseateles sp. DAIF2: G8A07_16965
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Entry
G8A07_16965 CDS
T06904
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kia
Roseateles sp. DAIF2
Pathway
kia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G8A07_16965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kia03021
]
G8A07_16965
03019 Messenger RNA biogenesis [BR:
kia03019
]
G8A07_16965
Transcription machinery [BR:
kia03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G8A07_16965
Messenger RNA biogenesis [BR:
kia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G8A07_16965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA_22
AAA
OB_RNB
AAA_28
DUF1269
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPF74441
LinkDB
All DBs
Position
3662065..3663327
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AA seq
420 aa
AA seq
DB search
MHLSELKALHVSALIKMGEELEIDNVARLRKQELMFAIMKKRAKAGEQVFGDGVLEVLPD
GFGFLRSPEASYMASTDDIYLSPSQIRRFNLHTGDMIEGEVRVPKDGERYFALVKVDRVN
GLTPEESKHKIMFENLTPLFPKEQFKLEREIRSEENIVGRIIDLIAPIGKGQRALLVAQP
KTGKTMMMQQLAHAITANHPEAHLIVLLVDERPEEVTEMLRTVRGEVISSTFDEPAARHV
QVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIGTALIDTGSRMDEVIYEEFKGTGNCEIHLDRRMAEKRVYPSILI
NKSGTRREELLLKPEILQKSWILRKLLYNMDEIEAMEFILDKMKASKNNHDFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttccgaactgaaagcgcttcacgtctccgccctgatcaagatgggcgaggag
ctggagatcgacaacgtcgcccgcctgcgcaagcaggagctgatgttcgcgatcatgaaa
aagcgcgccaaggccggcgaacaggtctttggtgacggcgtgctggaagtgctgccggac
ggcttcggcttcctgcgctcgcccgaagccagctacatggcgtcgaccgacgacatctat
ctgagcccgagccagatccgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gtgcgcgtgcccaaggacggcgagcgctatttcgcgctcgtgaaggtcgaccgcgtgaac
ggcctgacgcccgaggagagcaagcacaagatcatgttcgagaacctgacgcccttgttc
cccaaggagcagttcaagctcgaacgcgagatccgcagcgaagagaacatcgtcgggcgc
atcatcgacctgatcgcgccgatcggcaaaggccagcgcgccctgctggttgcccagccg
aagaccggcaagacgatgatgatgcagcagctcgcgcatgccatcaccgccaaccatccc
gaggcgcacctgatcgtgctgctggtggacgagcgtccggaagaagtgaccgagatgctg
cgcaccgtgcgcggcgaggtcatcagctccaccttcgacgagccggccgcccgccatgtg
caggtggccgagatggtgatcgagcgcgccaagcgcctggtcgagctgaagaaggacgtg
gtgatcctgctggactcgatcacccgcctggcccgcgcctacaacaacgtgctgcccagc
tccggcaaggtgctgaccggcggtgtcgacgccaatgcgctgcagcgccccaagcgcttc
ttcggcgcggcgcgcaatgtcgaggaaggcggctcgctgaccatcatcggcaccgcgctg
atcgacaccggctcgcgcatggacgaggtgatctacgaggagttcaagggcaccggcaac
tgcgaaatccatctggatcgccgcatggccgagaagcgcgtctacccctcgatcctgatc
aacaagtccggcacccgccgcgaggagctgctgctcaagcccgagatcctgcaaaagagc
tggatcctgcgcaagctgctctacaacatggacgagatcgaggcgatggagttcatcctc
gacaagatgaaggccagcaagaacaaccacgacttcttcgacatgatgaggcgcggtggg
tga
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