Roseateles sp. DAIF2: G8A07_26080
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Entry
G8A07_26080 CDS
T06904
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kia
Roseateles sp. DAIF2
Pathway
kia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G8A07_26080 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kia03019
]
G8A07_26080 (recQ)
03400 DNA repair and recombination proteins [BR:
kia03400
]
G8A07_26080 (recQ)
Enzymes [BR:
kia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G8A07_26080 (recQ)
Messenger RNA biogenesis [BR:
kia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G8A07_26080 (recQ)
DNA repair and recombination proteins [BR:
kia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G8A07_26080 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QPF76049
UniProt:
A0A7S9CBQ5
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All DBs
Position
5657266..5659137
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AA seq
623 aa
AA seq
DB search
MKIDHHAPQHILQEVFGYSAFRGAQADIVQHVSGGGDALVLMPTGGGKSLCYQVPAIARH
RGGRGVTLVVSPLIALMHDQVGALEEAGVHAAFLNSTLSSEEASRIEREMMSGRLVMLYA
APERITNPRFLAQLDSLHERGLLSLFAIDEAHCVSQWGHDFRNEYLELSLLHERFPDVPR
VALTATADDITRADIIERLRLQEARVFISSFDRPNIRYTIVEKDSKPREQLLRFIRDEHE
DDAGVVYCQSRKKVEETAAWLEAEGLKALPYHAGLDTGVRQRHQDRFLREDGIVMVATVA
FGMGIDKPDVRFVAHLDLPKNIESYYQETGRGGRDGAAANAWMTYGLADVVNQRRMIDDS
PSNEEFKQVQRGKLDALLALAEATDCRRQRLLGYFGEASQPCGNCDNCISPPATWDGTEA
ARKMLSCIYRFHQNGGQRFGAGHLIDVLRGKLTDKVGQYGHQSLSTWAVGADLSEQQWRA
VLRQLIALGHVFTEGEYHTLALAETARAVLKGEVQLLLRVPASAPKRGARGSTRGASGKS
GRAAAEALDLDGQAQQRFEALKAWRSEVAKEHGLPAYVIFQNVTLAEMARANPQSLDELS
GISGVGAKKLEAYGREILRVLEA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgatcatcacgccccccagcacatcctgcaagaagtcttcggctacagcgcg
tttcgcggcgcgcaggccgacatcgtccagcatgtgagcggcggcggcgatgcgctggtg
ctgatgcccaccggcggcggcaagagcctgtgctaccaggtgccggcgatcgcgcggcac
cgcggcggccggggcgtgaccctggtggtcagtccgctgatcgccctgatgcacgaccag
gtcggcgcgctcgaagaagccggcgtgcatgccgccttcctgaattccaccctcagcagc
gaggaggccagccgcatcgagcgcgagatgatgagcggccggctggtgatgctgtatgcc
gcgcccgagcgcatcaccaacccgcgcttcctggcccagctggactcgctgcacgagcgc
ggcctgctctcgctgttcgcgatcgacgaggcgcattgcgtcagccaatggggccacgat
ttccgcaacgagtacctggaactctcgctgctgcacgagcgcttcccggacgtgccgcgc
gtcgcgctgaccgccaccgccgacgacatcacccgcgccgacatcatcgagcgcctgcgg
ctgcaggaggcgcgcgtcttcatcagcagctttgatcggcccaatatccgctacaccatc
gtcgagaaggacagcaagccgcgcgagcagctcttgcgcttcatccgcgacgagcatgag
gacgacgccggcgtcgtctactgccagagccgcaagaaggtcgaggagaccgccgcttgg
ctggaggccgagggcctgaaggccctgccctaccacgccggcctggacaccggcgtgcgc
cagcgccaccaggaccgtttcctgcgcgaggacggcatcgtgatggtggccaccgtggcc
ttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcccacctggacctgccgaag
aacatcgagagctactaccaggagaccggccgcggcggccgcgacggcgcggcggccaac
gcctggatgacctatggcctggccgacgtcgtcaaccagcgccgcatgatcgacgacagc
ccgtcgaacgaggaattcaagcaggtgcagcgcggcaagctggacgcgctcttggcgctg
gcagaggccaccgactgccggcgccagcgcctcttgggctatttcggcgaggccagccag
ccctgcggcaactgcgacaactgcatcagcccgcccgccacctgggacggcaccgaggcg
gcgcgcaagatgctcagctgcatctaccgcttccaccagaatggcggccagcgcttcggc
gccggccatctgatcgacgtgctgcgcggcaagctgaccgacaaggtcggccagtacggc
caccagagcctctcgacctgggccgttggcgccgacctgagcgagcagcagtggcgcgcg
gtgctgcgccagctgatcgcgctgggccatgtgttcaccgagggcgaataccacacgctg
gcgctggccgagaccgcgcgcgcggtgctgaagggcgaggtgcaattgctgctgcgcgtg
ccggccagcgcgcccaagcgcggcgccaggggttccacgcgtggcgcctccggcaagagc
ggccgcgccgccgccgaggcgctggacctggacggccaggcccagcagcgcttcgaggcg
ctgaaggcctggcgctccgaggtggccaaggagcatgggctgccggcctatgtgatcttc
cagaacgtcaccctggccgagatggcgcgcgccaacccgcaaagcctggacgagctgtcc
ggcatcagcggcgtcggcgcgaagaagctggaagcctacggccgcgagatcctgcgggtg
ctggaggcctga
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