Kineothrix sp. MB12-C1: RBB56_01055
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Entry
RBB56_01055 CDS
T09298
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBB56_01055 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kib03019
]
RBB56_01055 (rny)
Messenger RNA biogenesis [BR:
kib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RBB56_01055 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Ribosomal_S18
DUF4229
Motif
Other DBs
NCBI-ProteinID:
WMC92908
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All DBs
Position
complement(210833..212377)
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AA seq
514 aa
AA seq
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MYVVIAVLATLIISVPVSAFVATSYRKKIVESKIGNAEDKAREIIDEALKTAETKKRESL
LEVKEESIRTRNELDKEIKERRAEAQRYERRVQQKEENIDKKSEAIEKKEAGLIAKEESL
AKQREEISQLNEQRLQELERISGLTSEQAKDYLLKIVEDEVKHESAVMIKEMESRAKEEA
DKKAKEYVVTAIQKCAADHVSETTISVVQLPNDEMKGRIIGREGRNIRTLETMTGVDLII
DDTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVEVMIKEEGEAA
TLEVGVHGIHPELVRLLGKMKFRTSYGQNALKHSIEVAQLSGLLAAEMGLDVRMAKRAGL
LHDIGKAVDHEMEGSHIQLGVELCRKYKESAIVINAVESHHGDVEPQSLIACLVQASDTI
SAARPGARRETLETYTSRLKQLEDITNNFKGVDKSFAIQAGREVRVMVVPDQITDADMIL
LARDISKQIEAELEYPGQIKVNVIRESRVIDYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttgtaatagcagtgcttgcaactctgattatttctgtgccggtgtcggcattt
gtcgcaacatcttatcgcaagaagattgtggagtctaagattggcaatgcggaagataag
gcaagggaaattattgatgaagctttgaagactgctgagacgaaaaagcgcgaatctttg
ctcgaagtgaaagaagagtccattcgtacgagaaatgaactcgacaaagaaattaaagag
cgaagagcggaagcgcagcgttatgagcgcagagtccagcaaaaagaagagaacatcgat
aagaaatcagaagctatcgaaaagaaggaagcaggcttgattgcaaaagaggaatctttg
gcgaaacagcgcgaagaaatctctcaactcaacgaacagcgactacaggaactagaaaga
atctcaggtttaacctccgaacaagcaaaagattatttattgaaaattgttgaagatgaa
gtaaaacatgaatctgctgtaatgatcaaagaaatggaaagcagagctaaggaagaagca
gataagaaagcgaaggaatacgtggtgacagccattcagaaatgtgcggcagaccatgta
tctgagaccaccatatccgttgtacagcttccgaatgacgaaatgaaaggcagaatcatc
ggtagagagggaagaaatatcagaactctcgaaacgatgacaggcgtggaccttattatt
gacgatacgccggaagcggtcattttatcgggctttgatccgattcgacgtgaagtcgca
agaattgctctcgaaaaattaattgtagatggacgtatccatccggcaagaattgaagag
atggttgaaaaggcgcaaaaagaagttgaagtaatgataaaagaggaaggtgaagccgca
acgcttgaagtgggtgtacatggtatccatcctgaacttgtaagattacttggtaaaatg
aaattcagaaccagctatggtcagaatgctttaaagcattcgattgaagtagctcagtta
tccgggcttttagcagcggagatggggctcgatgtcagaatggcgaagagagcaggctta
ctgcatgatatcggtaaggctgttgaccacgaaatggaaggttctcatattcaacttgga
gttgagctttgtaggaaatacaaagaatcagctattgtaattaatgcggtggaatcacat
catggagatgtggaaccacagtctctcattgcatgtttggtacaagcttccgatacgatt
tcggcggcaagaccgggtgcaagaagagaaaccttagagacatatacaagcagattgaaa
caattagaagatattacaaacaatttcaaaggtgttgacaaatcttttgctatacaggcg
ggtagagaggttcgagtaatggtagttcctgatcagattacggatgctgatatgatatta
ttagctagagatatttccaagcagattgaagcagagttggaatatcccggtcagattaaa
gtcaatgtaatcagagaatcaagggtaatagactacgcgaaataa
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