Kineothrix sp. MB12-C1: RBB56_01100
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Entry
RBB56_01100 CDS
T09298
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
kib
Kineothrix sp. MB12-C1
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kib03009
]
RBB56_01100 (rimO)
Enzymes [BR:
kib01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RBB56_01100 (rimO)
Ribosome biogenesis [BR:
kib03009
]
Prokaryotic type
ribosomal protein modification factors
RBB56_01100 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
WMC92916
LinkDB
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Position
complement(220388..221725)
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AA seq
445 aa
AA seq
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MKILFVSLGCDKNLVDSEVMLGMLSEKGYSFTDDETEAEIIVVNTCCFIGDAKEESVNTI
LEMAEYKKTGQVKALIVTGCLAQRYQQEIKDEIEEVDAILGTAAIDKIVETVEAVLAGKG
ESHIEPLDTPPLGDKKRMVTTGGHYAYLKIAEGCEKHCTYCIIPKVRGDYRSVPMEKLLA
EANRLADGGVKELVLVAQETTLYGMDLYGEKKLPELLRKLSEITGIYWIRVLYCYPEEIT
DELITVIKEEEKVCNYLDIPIQHGADTVLRRMGRRTNQAEIKAIVEKLRENIPDICLRTT
LISGFPGETQEDHEVLMDFVEEMEFDRLGVFAYSPEEDTPAATMENQVPEEIKEERKAQI
MELQQEIAFDAADRMVGRVLYAMIEGKVADEDAYVARTYKDAPNVDGYLFINTSQTLVSG
DFVKVKVTGSYEYDLIGEICDEFTE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattatttgtatcacttgggtgtgataaaaacctggttgattccgaggtcatg
ctcgggatgttgtccgaaaaagggtattcttttacagacgatgagacagaggctgagatt
attgtagttaatacttgctgttttatcggggatgctaaggaagagagcgtgaatacgatt
ctggaaatggcagagtataagaaaacaggacaggtgaaagcattaattgtaaccggttgt
ctggcacagcgttatcagcaggagattaaggatgaaattgaagaagtggatgcaatcctg
ggtacggcggctatcgataagattgtggagactgtggaagcggtgcttgcaggaaagggc
gagagccatatcgaaccgttagatacgccgcctcttggagataagaagcgaatggttacg
accggaggacattacgcctatcttaagatagcggaaggatgcgaaaagcactgtacatat
tgtattattccgaaagttagaggcgattatcgaagcgtaccgatggagaagttattggca
gaagccaatagacttgcagacggcggcgtgaaagaactcgtactcgtagctcaggaaacg
actctgtacggtatggacttgtacggggagaagaaattgccggagctgcttcgtaaatta
agtgagattaccggtatttattggattcgtgttctttattgctatccggaagaaattaca
gatgaactcattaccgtcataaaagaagaagagaaggtatgtaattatctcgatattccc
attcagcatggagcggatacggttcttagacgtatgggaagaagaactaatcaggcagaa
atcaaggcgattgttgaaaagttgagagaaaatattccggatatttgtttaagaacgacg
ttaatttcaggattccccggggaaacgcaagaagaccatgaagtattaatggattttgtg
gaggaaatggagtttgaccgcctcggtgtattcgcttattcgccggaagaagatactccg
gcagcgactatggagaatcaggtaccggaagaaataaaagaggaacgaaaagcgcagatt
atggaactgcagcaggagattgcttttgacgctgcagaccgaatggtcggaagagtgctt
tatgccatgatagagggcaaggtagcggatgaggacgcttatgtagcgagaacttataag
gatgcccctaatgtggatggctatttattcatcaatacgagtcagacgcttgtgagcgga
gattttgtgaaagtaaaagtaaccggttcttatgaatatgatttgataggggagatatgt
gatgaatttaccgaataa
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