Kineothrix sp. MB12-C1: RBB56_01305
Help
Entry
RBB56_01305 CDS
T09298
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kib
Kineothrix sp. MB12-C1
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kib03016
]
RBB56_01305 (truB)
Enzymes [BR:
kib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RBB56_01305 (truB)
Transfer RNA biogenesis [BR:
kib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RBB56_01305 (truB)
Prokaryotic type
RBB56_01305 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA_3
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WMC92956
LinkDB
All DBs
Position
complement(258282..259181)
Genome browser
AA seq
299 aa
AA seq
DB search
MYNGIINIYKEAGFTSHDVVAKLRGILKQKKIGHTGTLDPDAVGVLPVCLGSATKLCDML
TDKSKEYRVRFLLGRTTDTQDSSGQVLTQSPVTVTEAQVTAVIHSFLGDYDQVPPMYSAI
KVDGKRLYQLAREGKEIERKSRQVHIEYIHIEELALPEIAMVVGCSKGTYIRTLCHDIGQ
ELGCGAVMTHLERSRVGEFLMEEALPLSEVEQMVKEGTIDGHILPVERIFADYRKVTVDD
RFRKLIDNGNAFYEDMIMESGACIDGESVRVYSQDNRFYGIFAYSSYEKRFKPVKMFME
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggaattatcaatatctataaagaggctggcttcacttctcacgatgtagta
gcgaagcttcggggaattttaaagcagaaaaagatcggacatacaggtactttagacccg
gatgcggtaggggtactccctgtctgtctgggaagcgcaacgaagctttgtgatatgctt
acggataagagtaaggaataccgcgtacgctttttacttggaagaacaacggacacacaa
gatagttccgggcaagtgctgacacaaagtcctgtaacggttaccgaagcacaagttaca
gcggtgattcactcctttcttggcgattatgaccaagttccccccatgtattccgctatt
aaggtagatggaaaaagactttaccaactggccagagaaggtaaggaaatcgaacggaag
tcacgacaggtacatattgaatacattcatatcgaggaacttgcgctccctgaaatagct
atggtagtcggttgttcgaagggtacatatattcgtacactatgtcatgatattggacaa
gaactcggttgtggtgcggttatgacccatttagagcgcagccgtgtaggagaatttctc
atggaggaagcgttacctttgtccgaggtagagcagatggtaaaagagggaacgatagat
ggacatattcttccggtggagaggatttttgccgattaccggaaagtaacggtagatgac
aggttccgcaaattaatagataatggtaatgctttttatgaagatatgataatggaaagc
ggtgcctgtatcgatggggagtctgtcagagtatatagtcaggataatcgtttctatggt
atctttgcatatagttcttatgagaaacggtttaaaccggtgaaaatgtttatggagtaa
DBGET
integrated database retrieval system
