Kineothrix sp. MB12-C1: RBB56_05930
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Entry
RBB56_05930 CDS
T09298
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBB56_05930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kib03021
]
RBB56_05930
03400 DNA repair and recombination proteins [BR:
kib03400
]
RBB56_05930
Enzymes [BR:
kib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBB56_05930
Transcription machinery [BR:
kib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBB56_05930
DNA repair and recombination proteins [BR:
kib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBB56_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
DUF4332
RAD51D_N
MukB
Motif
Other DBs
NCBI-ProteinID:
WMC93797
LinkDB
All DBs
Position
complement(1271068..1272024)
Genome browser
AA seq
318 aa
AA seq
DB search
MFDFERPNIEVAEISEDKKYGKFVVEPLERGYGITLGNSLRRIMLSSLPGAAVSQVKIEG
VLHEFSSIPGVKEDVTEIIMNIKGLAIRNNSDTNEPKTAYVEFDGEGVVKASDIQVDQDI
EILNPDLVIATLSGKDTKLYMELTISKGRGYVGADKNKLEDLPIGVIAIDSIYTPVERVN
VTIENTRVGQITDYDKLTLDVYTNGTLVPDEAVSLAAKVLSEHLSLFIDLSENAKTAEVM
VEKEDDEKEKVLEMSIDELELSVRSYNCLKRAGINTVEELTNKTPEDMMKVRNLGRKSLE
EVLAKLKELGLQLNPSEE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgattttgaaagacccaatattgaggttgcagaaatctctgaagataaaaagtat
ggcaaatttgtagtagaacctttagaaagaggctatggcattacgctgggcaactcatta
agaagaattatgctttcttctttacctggtgctgcggtaagtcaggtgaagattgaagga
gttttacacgaattcagttccattccgggcgtaaaggaagatgttaccgaaatcattatg
aatattaaaggtctcgctattagaaataacagcgatacaaatgaacctaagacggcatat
gttgaatttgacggcgaaggtgttgtaaaggcatccgatattcaggtggatcaggatatt
gaaatcttaaatcccgatttagtaatcgctaccttaagcggaaaagatacaaaattgtat
atggagcttaccatttcaaaaggcagaggttatgtaggcgccgataagaacaaattggaa
gatttgccaatcggtgtgattgcaatcgattccatttatacacctgttgaaagagtaaat
gtgacgattgagaacactcgtgtaggtcagattacggactatgacaaactgacactcgat
gtgtatacgaacggaactttagttcccgacgaagcggttagtttggctgcaaaagtactc
agcgaacatttaagtcttttcatcgatctatctgaaaatgccaaaacggcagaagttatg
gtagaaaaagaggatgatgaaaaagaaaaggtattagaaatgagcattgatgagcttgaa
ctctctgttcgttcctataactgtttgaagagagccggaatcaatacggtggaagaatta
acaaacaaaacgcctgaagatatgatgaaggttcgtaacttaggacgcaagtccttggag
gaagttttggctaaattaaaggaactcggtttacagcttaatcccagcgaggaataa
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