Kineothrix sp. MB12-C1: RBB56_08080
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Entry
RBB56_08080 CDS
T09298
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib03030
DNA replication
kib03430
Mismatch repair
kib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBB56_08080 (dnaX)
03430 Mismatch repair
RBB56_08080 (dnaX)
03440 Homologous recombination
RBB56_08080 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kib03032
]
RBB56_08080 (dnaX)
03400 DNA repair and recombination proteins [BR:
kib03400
]
RBB56_08080 (dnaX)
Enzymes [BR:
kib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBB56_08080 (dnaX)
DNA replication proteins [BR:
kib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBB56_08080 (dnaX)
DNA repair and recombination proteins [BR:
kib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBB56_08080 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
TIP49
AAA_22
AAA_30
AAA_14
AAA_5
AAA_assoc_2
AAA_7
AAA_19
Rad17
RCF1-5-like_lid
DUF5906
AAA_18
TniB
Mg_chelatase
AAA_24
TsaE
AAA_16
DUF815
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
WMC94204
LinkDB
All DBs
Position
complement(1740329..1741906)
Genome browser
AA seq
525 aa
AA seq
DB search
MSYTALYRKFRPQEFEDVKGQDHIVTTLKNQIKAQRIGHAYLFCGTRGTGKTTIAKIFAK
AVNCQNPSDGSPCGECDLCKAIASGASMNVIEIDAASNNGVDNIREIVDEVSYSPAEGKY
KVYIIDEVHMLSIGAFNALLKTLEEPPGYVIFILATTEVHKIPITILSRCQRYDFRRITI
DTIADRLRELTLAEAVQVQDKALRYIAKTADGSMRDALSLLDQCIAFHFGEELTYDKVLD
VLGAVDTVFFSRLLEQILGKNVTGCIDLLEEMVIQGRELSQFVTDFTWYLRNLLLVLSSE
DIEDVIDVSTENLARLREEAQITDMDTIIRYIRIFSELSGKIRYMSQKRIWIEVALIKLC
KPSMETDEESLLGRVRELEEKVEKGVVAVVPQGDNSPALQEYQDKAVKSAKIPLPKALPE
DVEAVVKRWPSIVSNAQQPMKTYLKEAKLSLGGDNKLMIVLEDGLSSDYLTKNQENKEQL
TRMISEAVQKEIEINIQSIGSDREFEDSYIDLSKIIHMEIEVDNE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatacagcgttataccgtaagttccgcccccaggagtttgaagatgtaaagggg
caggatcatatagtaactacattaaaaaatcaaataaaggctcagcgtattggacatgcc
tatcttttctgcggaacgaggggaacgggtaagacgacgatagccaagatatttgctaaa
gcggtgaattgtcagaacccttcggatggaagtccgtgcggagagtgtgatctctgtaaa
gcgatcgcatcgggagccagcatgaatgtgatagaaatagatgctgcttccaataatggt
gtggataatataagggagattgttgatgaagtctcctattctccggcagaaggtaaatat
aaggtttatattattgatgaggttcatatgctgtcgataggagcctttaacgcacttctt
aagaccttggaggagccaccgggttacgttattttcattctggcgacgacggaagtgcat
aagataccgattacaattttatccagatgtcaaagatatgattttcgaagaataactatc
gatacgattgctgacaggctgcgggagctgacgttggccgaagctgtgcaggtacaggat
aaggcgcttcgatatattgctaagacggcagatggttctatgagagatgcccttagttta
ttggatcagtgcatcgcttttcattttggcgaagaattaacttatgataaagttctcgat
gtgttgggggcagtggatacggtatttttcagcaggctgctagaacagattctaggtaaa
aatgtaacgggatgtattgacttgctggaagaaatggtgattcaaggcagggagctgtcc
caatttgtgacggacttcacttggtacttgagaaatcttctattggtgttaagttctgag
gatatcgaggatgtcatcgatgtgtccacagaaaatctggcaagactgcgggaagaagcg
cagataacggatatggacactattataaggtatatacgaatcttttcagagctttccggg
aaaatccgttatatgtcacagaagcgaatatggatagaggtggcgcttattaaattgtgc
aaaccgagcatggagacagatgaagaatctttgcttggccgggttagggaactggaagaa
aaggtggaaaagggcgtcgtagctgttgtaccgcaaggagataattcgcctgcattgcaa
gaatatcaggataaagcggtgaagtcggcgaagataccgcttccgaaggctcttcctgag
gatgtggaagcagtagtgaaacgctggccttccattgtatcaaatgctcagcagccaatg
aaaacttatctgaaggaagctaagttaagtcttggcggtgataataaactaatgatagta
ttagaagatggtctctcatcggattatcttacaaagaatcaggagaataaagaacaactt
acacgtatgatttcagaagcagtacaaaaggaaatagaaataaacatacaaagtatagga
agcgatagagaattcgaggattcttatattgatttaagcaagataatccatatggaaata
gaggtagacaatgagtaa
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