Kineothrix sp. MB12-C1: RBB56_08725
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Entry
RBB56_08725 CDS
T09298
Name
(GenBank) DNA polymerase III subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib03030
DNA replication
kib03430
Mismatch repair
kib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBB56_08725
03430 Mismatch repair
RBB56_08725
03440 Homologous recombination
RBB56_08725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kib03032
]
RBB56_08725
03400 DNA repair and recombination proteins [BR:
kib03400
]
RBB56_08725
Enzymes [BR:
kib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBB56_08725
DNA replication proteins [BR:
kib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBB56_08725
DNA repair and recombination proteins [BR:
kib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBB56_08725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Sigma54_activat
GlgE_dom_N_S
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
WMC94327
LinkDB
All DBs
Position
complement(1891490..1892512)
Genome browser
AA seq
340 aa
AA seq
DB search
MAKFTDIIGQEQLKEHLQNALKLNKVSHAYIINGERSSGKEFVAKIFAAALQCERLPLQE
SDNLASSFEPCGECRSCKQMATGNQPDVIYVQHEKPGTIGVEDIRGQVNGSVAIKPYSSP
RKIYIISEGEKMTVQAQNALLKTLEEPPEYTVIIILTTNVDSLLTTILSRCVILNMKPVK
DTQVKRFLMETMQVPDYKADICVAFARGNIGKAKLLASSEEFDHVKEEAVTLLKYINDME
INEIVGAIKKISEYKFDVNDYMDILSIWYRDVLMFKATNDANHLIFREEIQYIRKVADRS
AYEGIEKVIAALEKAKNRLNANVNFDLTMELLLLTIKENS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttacggatatcatcgggcaggagcaattaaaagaacatttgcagaatgcc
cttaaattaaataaagtatcccatgcgtacattatcaatggagagagaagttccggaaaa
gaattcgttgcaaagatatttgcagcggctttgcaatgtgaaagactgccgcttcaggaa
tcagataatctggcaagtagtttcgagccttgcggtgagtgccgttcgtgcaaacagatg
gcgacagggaatcaacccgatgtaatttatgtgcagcatgaaaagccgggaacaataggt
gtggaagatatccgtggacaggtgaatggcagtgttgcgattaaaccttatagcagtccg
cgtaaaatatatattataagtgaaggcgagaagatgactgtgcaggcacagaatgccctg
ttgaagacattggaagagccgccggaatatacggttattattattttgacaacaaatgtg
gattcgcttctgactacgattcttagtcggtgtgtcatattgaatatgaagccggtaaag
gatacacaagtaaaacgattcctgatggagacgatgcaggtacccgattataaggcggat
atctgtgtggctttcgcaagaggtaatattggtaaagcgaagctgctcgcctccagcgag
gaattcgaccatgtgaaagaagaagcggttacacttcttaaatatattaacgatatggaa
ataaatgaaattgtcggagccattaagaaaatcagtgaatataaattcgatgtgaatgat
tatatggatatcttatccatatggtatcgggatgtgctgatgtttaaggctacaaacgat
gcaaaccacttgattttcagggaggaaatacagtatattagaaaagtggcggacagaagt
gcttatgaaggaatcgagaaggtgatagccgctcttgagaaagcaaagaaccgcctgaat
gcaaatgtaaatttcgacttaacaatggaacttcttcttctgacgattaaggagaattca
taa
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