Kineothrix sp. MB12-C1: RBB56_08960
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Entry
RBB56_08960 CDS
T09298
Name
(GenBank) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBB56_08960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kib03400
]
RBB56_08960
Enzymes [BR:
kib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBB56_08960
DNA repair and recombination proteins [BR:
kib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBB56_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Maelstrom
Motif
Other DBs
NCBI-ProteinID:
WMC94361
LinkDB
All DBs
Position
complement(1935665..1936495)
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AA seq
276 aa
AA seq
DB search
MIINMFKIQMKDFDLEKISKSGQCFRMNKAVGEDNRYTLIAYGNYLEIEHTEDSIFFSCT
QEEWDELWVNYFDCGRDYEKICETVDKEDKYMKRAVEYGSGIRILRQEIFEIIISFIISQ
QNNIPRIKKCVESLCESFGEERYNFRGERYYAFPTAKRLAGVTLEELQNCNLGYRSRYIL
KTARMIVENEVNLAGLMDMSYEEAKVELMKLSGVGVKVAECICLFGLYHVEAFPIDTHIQ
AVLSENYPEGFPFDRYEGYAGILQQYAFYYDIYGKV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgattattaatatgtttaagatacaaatgaaggatttcgatttggagaagataagcaaa
tcgggacaatgttttcgaatgaataaggcggtgggcgaagataatagatacacactgatt
gcctatggcaattatctggagatagaacatacggaagatagtatttttttctcttgtaca
caggaggagtgggatgaattgtgggtaaactacttcgattgtggaagagattatgagaaa
atatgtgaaactgtggataaagaggataaatatatgaagcgggcggtggaatatggaagc
ggtatccgtattttgcggcaagagattttcgaaataattatcagcttcattatatcacag
caaaataatattccccgcattaagaagtgtgtagagtctctctgcgaaagcttcggagaa
gagagatataacttccgcggagaaaggtattacgcatttccgacggcaaagaggcttgcg
ggggtgacccttgaagaattacaaaactgcaatctcggctataggagccgttacatatta
aaaactgcaagaatgatcgttgagaatgaggtgaatcttgccggacttatggatatgagt
tatgaagaggctaaggttgaattaatgaagctgtcgggggttggtgtcaaggtagcggaa
tgcatctgtttatttggattataccatgtagaagcatttcctatcgatacgcatattcag
gcggtgctttcggagaattatccggaaggctttccttttgaccgatatgaaggttatgca
ggaattttacagcaatatgcattttattatgatatttacggaaaagtgtga
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