Kineothrix sp. MB12-C1: RBB56_09415
Help
Entry
RBB56_09415 CDS
T09298
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kib
Kineothrix sp. MB12-C1
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kib03032
]
RBB56_09415 (gyrA)
03400 DNA repair and recombination proteins [BR:
kib03400
]
RBB56_09415 (gyrA)
Enzymes [BR:
kib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RBB56_09415 (gyrA)
DNA replication proteins [BR:
kib03032
]
Prokaryotic type
DNA Topoisomerases
RBB56_09415 (gyrA)
DNA repair and recombination proteins [BR:
kib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBB56_09415 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WMC91107
LinkDB
All DBs
Position
2023692..2026268
Genome browser
AA seq
858 aa
AA seq
DB search
MEDNVKDTVFDKVHDVDLKKTMETSYIDYAMSVIASRALPDVRDGLKPVQRRVLYSMIEL
NNGPDKPHRKSARIVGDTMGKYHPHGDSSIYGALVNMAQPWSTRYPLVDGHGNFGSVDGD
GAAAMRYTEARLSKISMELLADINKDTVDFIPNFDETEREPAVLPSRYPNLLVNGTTGIA
VGMATNIPPHNLREVIDSVVKIIDNRVEEDRDTDIEEILSIIKAPDFPTGGIILGTRGSE
EAYRTGRGKVRVRAVTDIETLPNGKSRIIVTELPYMVNKANLILKIAELVKLKKIDGITD
LRDESDREGMRIVIELRRDANANVIMNQLYKHTQMQDTFGIIMLALVNNEPKVMNILDML
TNYLAHQEEVVTRRTKYDLNKAEERDHILQGLLIALDHIDEVISIIRSSNNVQIAKQRLI
ERFGLSDAQAQAIVDMRLRTLTGLERDKIENEHKELLEKIAALRAILADRKLLLGVIREE
ISIISEKYGDERRSVIGFDVYDINMEDLIPKDNTVIAMTSLGYIKRMTIDNFKSQNRGGK
GIKGMQTIEEDFIEDLLMTTTHHYIMFFTNYGRVYRLKAYEIPEAGRTARGTAIINLLQL
TPGEKISAIIPVKDYEEDKNLFMVTKKGIVKKTHIMEYSNVRKNGLAAINLREDDELIEV
KITDKNTEIFLVTRQGICIRFKETDVRATGRASMGVIGMNLIDRDEIVGMQLDHQGDSLL
IVSENGMGKRTYLEEFTVQKRGGKGVKCYKITEKTGYVVGVKAVDDDHEIMMITTLGIII
QLRMDDISTLGRITSGVRMINLDDGVKVARIAKVREKVSNGNQEFENLEDALEDIPEEER
HPVIEEEEVTLPVEEIEE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggaagataatgttaaggacacagtctttgataaagttcatgatgttgacctgaaaaag
acgatggagacctcttatattgattatgcgatgagcgttatcgcctctcgtgcacttcca
gatgtaagagatggtttgaaaccggtgcagcgaagagtgctgtattccatgatagaatta
aataatggccctgataagcctcatagaaagagcgcacgtattgtcggagatacgatgggt
aaatatcatcctcacggagatagttctatctatggtgctctcgtaaatatggcacagcct
tggtctactcgttatccgctcgtagatggtcatggtaacttcggttctgtggatggagat
ggtgcagcggcgatgcgttatacggaagcgaggctttctaagatttccatggagcttctt
gccgatattaataaagatacggtagatttcatccctaacttcgatgagacagagagggaa
ccggctgtacttcccagccgttatccgaatctacttgtgaatggtactacaggtattgct
gtcggtatggcaactaacattccacctcacaatttacgagaggtgatcgattcagttgtt
aaaataatagataatagagtggaagaagacagagatacggatatcgaagagattctttct
attatcaaagctcctgactttcctacgggaggtattattcttggaacgaggggcagtgaa
gaagcataccgtaccggccgcggtaaagtaagggtccgcgcagtgacagatatcgagaca
cttcccaatggaaagagtagaatcatcgtaacggaacttccgtatatggtgaacaaagcg
aatcttattcttaaaattgcagagctcgtaaagttaaagaaaatagatggtattaccgat
cttcgtgatgaatctgatagagaaggtatgcgtatcgttattgaattacgaagagatgcg
aatgctaacgttattatgaatcagctttataagcatacacagatgcaggatactttcggc
attattatgcttgctctcgttaataatgaaccgaaagtaatgaatattctagatatgctt
acgaattatcttgcacatcaggaagaagtagttacaagaagaacgaaatatgatttaaat
aaagcggaagaacgcgatcatatcttacaaggtttgttaattgctctcgatcacatcgat
gaagtaattagtattattaggagtagtaataatgtacaaatagcgaaacagagattgata
gaacgtttcgggctttccgatgcacaagctcaagctattgtagatatgagactccgtaca
ttaaccggattagaaagagataaaatagagaatgaacataaagaactgttagaaaaaata
gcagcacttcgtgcaattcttgctgatagaaaattgttgctcggtgtgattagggaggaa
atatccataatttctgagaagtatggtgatgaaagaagaagtgtgataggctttgatgta
tatgatattaatatggaggatttgattcctaaggataatacagttattgccatgacgagc
ttaggctatattaagcgtatgaccattgataacttcaagagccagaacagaggcggtaaa
ggtattaaagggatgcagacgatagaagaagacttcatagaagaccttcttatgactacg
acccatcattatatcatgttctttactaattatggacgtgtataccgtctgaaagcttat
gaaataccggaagcaggaagaactgccaggggaacagcaattattaatttattacagctt
actcccggagagaagatatccgctattataccggtaaaagattatgaagaagataaaaac
ttatttatggtaacgaagaagggcattgttaaaaagactcatattatggagtatagtaat
gtgagaaagaatggacttgcagctattaaccttcgtgaagatgatgaattaatagaagtt
aaaataaccgataaaaatacagaaatcttcctcgttacaagacaaggtatttgtattcgc
tttaaagagaccgatgtaagagctaccggaagagcttctatgggcgttatcggtatgaat
cttattgatagagatgaaattgttggaatgcagttagatcatcagggagattctcttctt
atcgtatctgagaacggaatgggtaaacgtacttatttggaagaattcaccgtacaaaaa
cgcggcggtaaaggagtaaaatgttataagattaccgaaaagaccggatatgtagtaggt
gtaaaagcagtcgatgatgatcatgaaattatgatgatcactacactcggtattattatt
cagcttcgcatggatgatatatccactttaggaagaattacttccggtgtgagaatgatt
aatttggatgatggtgtcaaggtagcaagaattgctaaagtaagggaaaaagtatcaaat
ggaaatcaggaattcgaaaatctggaggatgctttggaagacattcctgaggaagaaaga
catccggtgatcgaagaagaggaagtaactcttccggtggaagaaatagaagaataa
DBGET
integrated database retrieval system
