Kineothrix sp. MB12-C1: RBB56_12075
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Entry
RBB56_12075 CDS
T09298
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBB56_12075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kib03400
]
RBB56_12075
Enzymes [BR:
kib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RBB56_12075
DNA repair and recombination proteins [BR:
kib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBB56_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
PIF1
Helicase_RecD
HHH_5
nSTAND3
UvrD-helicase
AAA_22
T2SSE
NPHP3_N
SRP54
AAA_28
AAA_5
AAA_16
AAA
SLFN-g3_helicase
RsgA_GTPase
DAP3
UvrD_C
HHH_2
ResIII
ABC_tran
AAA_24
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WMC91599
LinkDB
All DBs
Position
2589822..2592077
Genome browser
AA seq
751 aa
AA seq
DB search
MESVKGYVEHIIYRNGENGYTVMNMMSGREEIICVGVFRTIDEGETLEVKGNYVDHPVYG
KQLKVDDYHITAPDDVVSMERYLSSGAIKGIGEALAARIIKMFGEDSFRIIEEEPERLSE
VKGISERKAREIALQMEEKKDMREIMVFLQKYGISGTLAMKIYNTYGMGIYGILKENPYK
LAEDIAGVGFKIADDIANKVGIHIDSDYRIRSAVLYVLLQATMEGHVYLPEEILLRRAAE
LLGVESALIEPQLLNLAIDRKIVIKLPSSGEETNLKKVYAATYYYEELNCAKMLHELNIS
IHKEEGLLPAEEERIRSRIKSIEKEQGIELDELQRKAVTESIKNGLFILTGGPGTGKTTT
INTIIRYYAQENMDIFLAAPTGRAAKRMTETTGYEARTIHRLLELSGAVAEENKKAKFEK
NEENPLEADVIIVDEMSMVDIHLFQSLLKAIMPGTRLVMAGDINQLPSVGPGQILKDLID
SQCFPVVMLQKIFRQAEESDIVINAHAINKGEQIELNNKSKDFFFLERSDVNVIYKHMVQ
LICEKLPPYVNANPYDIQVLTPMRKGSLGVDVLNGILQEYLNPPDSSKVEHPSAEGVYRV
GDKVMQIKNNYQIEWEVVSKYGIPIDRGMGVFNGDIGVIKEINDYAQEIIVEFDEHRRVR
YPFHQIDEIELAYAVTIHKSQGSEYPAVIMPLLSGPRMLFNRNLLYTGVTRAKNCVTILG
SRHTVNEMIANENQNRRYTSLCERIRELDAI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgtaaagggatatgtagagcatattatatatcggaatggcgaaaatggctat
acggttatgaatatgatgagcgggcgggaagaaattatctgtgtcggtgtgtttcgaacc
attgatgaaggtgagacgcttgaagtgaaaggcaattatgtggatcatcctgtatatggc
aaacaacttaaagtggatgattatcatatcactgcccccgatgatgtagtgagtatggaa
agatatcttagttccggtgctatcaaagggataggagaagcacttgcggctagaattata
aagatgtttggggaagatagcttccgtattattgaagaggaaccggaacgcctatcggaa
gtaaaaggaattagcgagaggaaagcgcgggaaatagccctccaaatggaagagaaaaag
gatatgagagagattatggtatttctccagaaatatggaatctccggtacccttgccatg
aaaatatataatacctacggaatggggatctatggaatattaaaagaaaatccttataag
ttggcggaggatattgccggagtaggatttaaaattgcggatgatatagccaataaggta
ggaattcatatagattccgactatcgtattcgaagtgctgtgttgtatgtactcctacag
gcaacgatggaggggcatgtgtatctgccggaagaaatacttctaagaagagcagcggag
cttcttggagtagaaagcgcattgatagagccgcagcttcttaatttggcgatagatagg
aagattgtaataaagcttccttcatcgggtgaggagacgaacctgaaaaaggtatatgcc
gccacttattattatgaggagctgaattgtgccaagatgcttcatgaattgaatatatct
attcacaaagaggaagggctccttccggcggaagaagaaagaattcgaagccgtattaaa
agcatcgaaaaagagcaagggattgaactcgatgaattacaacgtaaggctgtaacagaa
agcattaaaaatggtttattcattcttaccggaggccccggaaccggtaaaactacgacc
attaatacaattattcgttattatgcgcaagagaatatggatatttttcttgcggcacct
acgggacgggcggcgaagagaatgacagagacaacaggatatgaagcgcggacgattcat
cgtctgttggaattgagcggagcggtagcagaagaaaataaaaaggcgaagtttgaaaaa
aatgaagaaaatccgttagaagcagacgttattattgtggatgaaatgtcgatggtcgat
attcatctgtttcagtcgttgttaaaagcaataatgcccgggacaaggctcgttatggca
ggggatatcaaccagcttccctcagtaggcccgggacaaatattgaaggatctgattgat
agtcaatgtttcccggtcgttatgctacagaagatattcaggcaggcggaggaaagcgat
attgttatcaatgcccatgccatcaataagggtgaacagatagaattgaataataaaagt
aaggattttttctttttggagcgcagcgatgtgaacgtaatctataagcatatggtacag
cttatctgtgagaagctccctccatatgtgaatgccaatccctatgatattcaggtactc
actcctatgcggaaagggagtcttggggttgacgttctgaatggaattctacaagaatac
ttgaatccgcccgatagctccaaggtggagcatccctctgcagaaggtgtgtaccgggta
ggggataaggtaatgcagattaaaaataattaccagatagaatgggaggtagtgagcaaa
tacgggattcctattgaccggggaatgggggtattcaatggggatatcggagtgatcaag
gaaattaatgattacgcacaggaaataattgtagaattcgatgagcatagaagagtgcgc
tatcctttccaccagatagatgagattgaattggcttatgcggtgactatccataaatca
caaggaagcgaatatcccgcagttatcatgccgctgttatcaggaccgcgtatgctgttt
aatcgtaatttgctgtatacaggcgtgaccagagcgaaaaattgtgtaacgattctgggg
agtaggcatacggtgaatgagatgattgcaaatgagaaccagaataggagatacaccagc
ttgtgtgagagaatccgggaattggatgctatatag
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