Kineothrix sp. MB12-C1: RBB56_13195
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Entry
RBB56_13195 CDS
T09298
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib00300
Lysine biosynthesis
kib00470
D-Amino acid metabolism
kib01100
Metabolic pathways
kib01110
Biosynthesis of secondary metabolites
kib01120
Microbial metabolism in diverse environments
kib01230
Biosynthesis of amino acids
Module
kib_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBB56_13195 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBB56_13195 (dapF)
Enzymes [BR:
kib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RBB56_13195 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WMC91814
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Position
2879429..2880268
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AA seq
279 aa
AA seq
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MEFTKMHGCGNDYIYVNGFIEEIAAAKKPELVRRLSDRHFGIGADGVIFINRSSEADFEM
EMYNADGSRGEMCGNGIRCVAKFVYDKSMTDKKSVSVVSAGHIKYLDMTVKNGDVDTVKV
NMGTPILKATDIPVISDNEEVIDEEIEVDGTIYKMTCVSMGNPHAIIFMDDVASLNIEEI
GPRFENHLRFPNRINTEFVKVIDRHTVEMRVWERGSGETLACGTGACGVVVACVLNGLTE
AEVTVKLLGGELHIVWDRAENLVYMTGPAETVFEGEIHI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacaaaaatgcacggatgcggcaacgattacatttatgtgaatggatttata
gaggaaatagcggcggctaaaaagccggagctagtaagaagattaagcgacagacatttt
gggattggtgcggatggtgttatctttattaaccgatcatcggaagctgattttgaaatg
gagatgtataatgcggatggctccagaggagagatgtgtggaaacggtatccgttgtgta
gccaaatttgtttatgataaaagtatgacggataagaaatcagtaagcgtagtgagtgcc
ggacatattaaatatctggatatgaccgtaaagaacggagatgtggatacggtgaaggtg
aacatggggacaccgatattaaaagccacggacatacctgtcatttctgataatgaagaa
gtaatcgatgaggagatagaagtagacggcactatttataaaatgacatgtgtgtcaatg
gggaatcctcatgccattattttcatggatgatgttgcctccctgaatattgaagagata
ggtcctcgtttcgagaaccatctccgttttccgaaccggatcaatacagaattcgtaaag
gtgattgacaggcatacggtggagatgcgtgtatgggaaagaggatcgggagaaacgctc
gcttgcggaacaggagcctgcggagtcgtcgtagcctgtgttctaaatggtttgacggaa
gcggaagttactgttaaactattaggtggcgaacttcacattgtatgggatagggcagaa
aatctcgtctatatgacaggacctgccgagaccgttttcgaaggtgaaatccatatatag
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