Kineothrix sp. MB12-C1: RBB56_13470
Help
Entry
RBB56_13470 CDS
T09298
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
kib
Kineothrix sp. MB12-C1
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kib03400
]
RBB56_13470 (addB)
Enzymes [BR:
kib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBB56_13470 (addB)
DNA repair and recombination proteins [BR:
kib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RBB56_13470 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WMC91868
LinkDB
All DBs
Position
2947461..2950865
Genome browser
AA seq
1134 aa
AA seq
DB search
MGLQFYFGSSGAGKSSRLHEEIVRRSMEEPETNFFVIVPDQFSMQTQMDLVKAHPRKGIM
NIDVLSFGRLSHRILEEVGADGRMVLDDTGKSLVLRKVAENIQEEMPVIGSNLRKIGYIH
EVKSVISEFMQYGIGEKELVQIAEYAQKRGALYHKLKDLEILYKSFLTYIHEKYITTEET
LDLLCDVLPKSKLIRGSVIAFDGFTGFTPIQNRLIQRLMALSKEVIVTVTMDAAQNPYVL
DGEQKLFYLSKKTVADLRKLAVEAEVKLAKDIFLKEDILPRFKENEEMRHLEKYLFRYPA
KVYKKENTALHLLETSSPGEEVRQVCIKIRQLIRQQGYCYRDFAIVTGNLEAYAGHMETE
ASKFEIPVFMDKTRGILLNPFIEYIRSSLKIVMENFSYQSVFHYLRSGLAGFDREETDRL
ENYVIACGIKGKTRWMNLFTRKDEREGAEEELARFNAMREKFIGQIGPLIGKANTAGERV
RALYQFITDNKVQEKLAAYEKMFERRNEAARAKEYGQIYRLVMDLLDQIESLLSQEKMTI
KEFADILDAGFGEIEVGTIPQNVDRVVVGDIERTRLKEIKVLFFIGINDGNIPKNAGMGG
IISDIDREFLQESPYALAPTPRQQMYIQRLYLYMNMTKPSEQLYLSYCKVNSEGKSIRPA
YLIDTVSKLFPCLHIEKPELSGMERRMETRRAGLDYLTDMLREYAAGRLTEEEKKQFITV
YRTYREDEAYRERIDTLAEAAFTYYREKVLGKNIANALYGNLLLSSVSRLETYAACAYAH
FLQYGLSLDEREEYSFEAVDMGNVFHGVLELFSGTLQEKGYTWFDFGEEAAEEMLLQAME
GYAASYGNTVLYSTARNEYAIERMHRILKRTVMTLQYQLKKGSFLPENFEMSFMMAENLE
AVNIALSEKEKIKLRGRIDRIDTYEDEEHVYVKVIDYKSGNRKFNLAALYYGLQLQLVVY
MNAAVEMEKKKHPEKEVVPAALLYYHVADPMVKAEEEVTPEQINGKLLKELRMTGVVTEN
DKIVSLLDGEFADKSDVVPVERKKDGSYSAKSSVIKAEDMKEISDYVNKKIKQIGTDILR
GKIEINPCEQSGGTSCDYCVYKNVCGFEEGIGGYHYRRLENLEDEEVMERIRGE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggattacaattctattttggcagctcaggagccggtaaaagcagtcggctgcatgaa
gagattgtcagacgttcgatggaagagccggagacgaactttttcgttattgtgccggat
cagttcagcatgcagacgcagatggacttggtgaaggcacatccgaggaagggaattatg
aatatcgatgtgctcagctttggccgattgtctcatagaatcttggaggaagtgggagcg
gatgggcgtatggttctggatgataccggtaagagccttgttcttaggaaggtggcggag
aatattcaggaggaaatgcctgttataggaagcaatctgagaaaaataggctatattcat
gaagtaaagtccgtgatttccgaattcatgcaatatggaattggagagaaggaactcgtt
cagattgcggaatatgcccaaaaaagaggggctctttatcataagctgaaagacttggag
attttatataaaagcttcctgacctatattcatgagaaatatattacgacggaggaaacc
ctggatttgctctgcgatgtacttcccaaatcgaaattgatacgtggaagtgtcatcgct
ttcgacggctttacaggatttaccccgatacaaaacaggctgattcaacggttgatggca
ttgtccaaggaagtgatcgttacggttactatggatgcggcgcagaatccttatgtattg
gacggcgagcagaagcttttttatctcagtaaaaagacggtggcagatttacgaaaactg
gcggtggaagctgaggtgaaattagcgaaagatatctttttaaaagaagatattttaccg
agattcaaagaaaacgaagaaatgagacatctggaaaagtatttgttccgatatccggcg
aaggtctataagaaggaaaatacagcgctgcatcttctggaaacttcctctccgggggaa
gaggtacgtcaggtttgtattaaaatacgtcagcttatcaggcagcaaggttattgttat
cgggattttgccattgtaacgggcaatttggaggcctatgccggtcatatggagacggaa
gcttccaagttcgagattcctgtttttatggacaagacaagaggaattttactcaatccg
tttattgaatatatcagaagctccttgaaaatcgtaatggagaatttctcctatcaatcc
gtctttcattatttgcgcagcggacttgccggttttgacagagaggaaacagaccgtttg
gagaattatgtgattgcctgtggaatcaagggaaagacccggtggatgaatctttttaca
agaaaggatgaaagagaaggtgcagaggaagaattggcccggttcaacgctatgcgtgag
aaatttatcggacagatagggcctctcattggcaaggcgaatactgcgggagagagggta
cgggcactgtatcaattcattacagataataaggtacaagagaaactggccgcctatgaa
aagatgttcgagcgaagaaatgaagctgcaagggcgaaggaatacgggcagatatatcgt
ttggtcatggatttattggatcagatagagagtcttctttcccaggaaaaaatgacgata
aaggagtttgcagatattttggatgcaggctttggcgagatagaggtaggtacgattccc
caaaatgtagatcgcgtagtggtaggagatatcgagagaactcgtttgaaagagattaag
gtgctgttctttatcgggattaacgatggtaatataccgaagaatgcgggtatgggtgga
attatctcggatattgaccgggaattcttacaggagtcgccttatgctctggcgcccaca
cccagacaacagatgtatattcaaaggctttatctgtatatgaatatgacgaaaccttcg
gaacagctatatctttcgtattgtaaggtaaacagcgaaggaaagagcatacgtcctgca
tatttaatcgatactgtgagcaagctttttccttgtctgcacattgagaaaccggaactc
tccggtatggaaagaaggatggaaacaagacgggcagggttggattatctgaccgatatg
ttgagggaatatgcggcaggcaggcttacggaagaggaaaagaaacagtttattacggta
tatcgtacttatcgtgaggatgaggcatatagagagcggattgatactttggcagaagca
gcctttacctattatcgagagaaagtattgggtaagaacatagccaatgccctatatggg
aatcttctccttagcagtgtgagccggttggaaacctatgccgcttgtgcttatgcgcat
tttctgcaatatgggctttctctggatgagcgggaagaatatagctttgaagcggtggat
atgggaaatgtattccacggtgtcttggagttattttcaggaaccttacaagaaaaaggg
tatacatggtttgatttcggtgaggaagcggcggaggaaatgcttttgcaggcgatggaa
ggttacgcagcctcttatggcaatacagtgctttatagcacggcaaggaatgaatatgcc
atcgagcggatgcaccgcatcttgaaacgtacggtaatgaccttacaatatcaactgaaa
aaaggaagctttttgccggaaaactttgaaatgtcctttatgatggcagaaaatctggaa
gcggttaatattgctttatcggaaaaggaaaagataaagctgcgaggacgaatcgaccgt
atcgatacttatgaggatgaagagcatgtctatgtgaaagtcatcgattataagtctgga
aacaggaaatttaatctggcggccctttattacggtctgcagctacagctcgtagtctat
atgaatgcagcggtggaaatggaaaagaagaagcatccggagaaggaagtagttccggcg
gcccttttatactatcatgtggcagaccctatggtgaaagcggaggaggaagtgactcct
gagcagattaatggtaagcttctgaaagaacttaggatgaccggagtagtcactgaaaat
gacaagattgtcagtttgttggatggtgaatttgcggataagtcggatgttgtgcctgtt
gaacgcaaaaaagatggaagctacagtgcgaaatcgagtgtcataaaggcggaagacatg
aaggaaatctccgattacgtcaataagaagattaagcagatcggaaccgatattttacgg
ggaaaaatagaaatcaatccttgcgaacaaagcggagggacttcttgtgattattgcgta
tataagaatgtatgtggattcgaagaaggaatcggcggatatcactaccggaggctggag
aatctggaggatgaggaagtgatggaaaggatacgaggggaataa
DBGET
integrated database retrieval system
