Kineothrix sp. MB12-C1: RBB56_15140
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Entry
RBB56_15140 CDS
T09298
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBB56_15140 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kib03019
]
RBB56_15140 (groL)
03110 Chaperones and folding catalysts [BR:
kib03110
]
RBB56_15140 (groL)
03029 Mitochondrial biogenesis [BR:
kib03029
]
RBB56_15140 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kib04147
]
RBB56_15140 (groL)
Enzymes [BR:
kib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RBB56_15140 (groL)
Messenger RNA biogenesis [BR:
kib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RBB56_15140 (groL)
Chaperones and folding catalysts [BR:
kib03110
]
Heat shock proteins
HSP60 / Chaperonin
RBB56_15140 (groL)
Mitochondrial biogenesis [BR:
kib03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RBB56_15140 (groL)
Exosome [BR:
kib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RBB56_15140 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RBB56_15140 (groL)
Exosomal proteins of breast cancer cells
RBB56_15140 (groL)
Exosomal proteins of colorectal cancer cells
RBB56_15140 (groL)
Exosomal proteins of bladder cancer cells
RBB56_15140 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HAD_2
Motif
Other DBs
NCBI-ProteinID:
WMC92170
LinkDB
All DBs
Position
3308199..3309818
Genome browser
AA seq
539 aa
AA seq
DB search
MAKELKNGAEARAALEAGVNQLADTVRVTLGPKGRNVVLDKSFGAPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMINEGIKNLAAGANPIILRKGMK
KATECAVEAIEKMSSKVNGKEQFARVAAVSSGDDEVGQMVADAMEKVSGDGVITIEESKT
MQTELDLVEGMQFDRGYISAYMATDMDKMEAVLDNPYILITDKKLSSIQEILPLLEQIVQ
SGAKLLIVAEDVEGEALTTLIVNKLRGTFNVVAVKAPGYGDRRKAMLEDIAILTGGQVIS
EELGLDLKEATMEQLGRAKSVKVQKENTVIVDGEGDKEAIQARIAQIKKQIEETTSDFDK
EKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAAEEGIIAGGGSAYIHA
SKEVAKLAEVLEGDEKTGAKIVLKALESPLYHIAANAGLEGSVIINNVKEAEVGIGFDAL
KEEYVDMVAEGILDPAKVTRSALQNATSVASTLLTTESVVANIKEDAPAMPAGGMGGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaattaaaaaatggcgcagaagcccgcgcagcattagaggcaggcgttaat
cagttagcggatacggtaagagtaactttgggacctaagggaagaaacgtagtgctggat
aaatctttcggcgcaccccttattaccaatgatggtgttacgattgcaaaagaaatcgaa
ctcgaagatgcctttgaaaatatgggagcacagcttgtaaaagaagtggcgacgaagaca
aatgacgtggctggtgatggtacaacaaccgctaccgtactcgcacaggcgatgattaac
gaaggaattaagaatcttgcagcaggagctaacccgatcatcttaagaaaaggtatgaag
aaggctacggaatgtgcagtggaagcgatcgagaagatgagctctaaggtaaatggaaaa
gaacagtttgccagagtagcagcagtttcttccggcgatgatgaagtaggccagatggta
gccgacgctatggagaaggtatccggcgatggcgttatcacaattgaagaatctaagaca
atgcagacagaacttgacctcgtagaaggtatgcagttcgatagaggatatatttccgca
tacatggcaacagatatggataagatggaagcagttcttgataatccttatatcctgatt
acagataaaaagctttccagcattcaggagatcttgcctcttttagagcagatcgtacag
tccggtgcgaagttacttatcgtagctgaagacgtagagggagaggctctcactacatta
atcgtaaataaacttcgtggaacattcaacgtagttgcagtaaaggctccgggctatggc
gacagaagaaaagctatgctcgaagatatcgcaattctcacaggtggtcaggttattagt
gaagaactcggccttgatctgaaagaagctacgatggaacagctcggccgtgcgaaatcc
gtgaaagtacagaaggaaaacacggtaatcgttgacggagaaggcgataaagaagcgatt
caggcaagaattgcacagattaagaaacaaattgaagagactacttcagatttcgataaa
gaaaaactccaggagcgtcttgcaaaattggcaggaggagttgcagttattcgtgtaggt
gctgctacagagaccgagatgaaagaagcgaagcttcgtatggaagatgctttgaatgca
acaagagcagcagcggaagaaggaattatcgcaggtggtggttccgcgtatatccatgcg
tccaaggaagttgcgaaattagcagaggtattggaaggcgatgagaagacaggagcgaag
attgttctgaaggcattagaatctccgctgtatcatatcgcggctaatgcaggtcttgaa
ggttctgtaattatcaataatgtaaaagaagctgaggtaggcataggattcgatgcatta
aaagaagaatatgtagacatggttgcagaaggtattcttgatcccgccaaggtaacaaga
agtgctcttcagaatgcaacgagtgtagcttctacacttcttacaacggaatccgttgta
gcgaacatcaaagaagatgccccggcaatgcctgccggaggaatgggcggaatgatgtaa
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