Kineothrix sp. MB12-C1: RBB56_15445
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Entry
RBB56_15445 CDS
T09298
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib00470
D-Amino acid metabolism
kib00550
Peptidoglycan biosynthesis
kib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBB56_15445 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBB56_15445 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kib01011
]
RBB56_15445 (murD)
Enzymes [BR:
kib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RBB56_15445 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
kib01011
]
Precursor biosynthesis
Amino acid ligase
RBB56_15445 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Pyr_redox_2
FAD_binding_3
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WMC92227
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All DBs
Position
3380199..3381569
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AA seq
456 aa
AA seq
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MDLRNRKVLIIGTGLSGIGAAKLLIRLGAVPVLYDENLEVKKTAVLSKLPKDSKGEVVIG
SLPEDLVGEIALVVPSPGVSVEAEIIKRFQQKEVPVWGEIELAYRYAKGRLIGITGTNGK
TTTTSLIGQIMEEYYRSVYVVGNIGNPYTEIALETKDDTVVVAEISSFQLETTENFRPQV
SAILNITPDHLDRHHSMENYAAVKERIAENQTDKEVCVLNYENEYTKAFAERCSADVLFF
SSVRRLGRGIYLEGEDIYLAGIGPAAGSDRKKIMTIHDMNLVGICNVENVMAAIAVALSA
EVPLAHILDTIKRFQAVEHRIEFVATKSGVDYYNDSKGTNPDAAIHGIRAMSKPTVLIGG
GYDKQSEYDEWIEAFDGKVKAFVLIGQTADKIENCARRHGIENIFRADSFEEALKICTRE
AVSGDAVLLSPACASWGMFPNYEVRGKVFKDYVNAL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacttacgaaatagaaaagttctgataatcggaacgggactcagtggtattggagca
gcgaagttgctgatacgtcttggggcagttccggtcttatatgatgagaacctggaggtt
aagaagacggcagtgctttcaaagctgccaaaggatagcaaaggtgaagtcgtaatcggt
agcctgccggaggatttagtcggagaaatcgcacttgtagttcctagtccgggagtttcg
gtagaggcggagattattaagagattccagcaaaaagaagttcctgtatggggagaaatt
gaattggcttaccgttatgccaaaggcaggctgattggaatcacagggacaaacgggaag
acaacaacgacttccttgatcgggcagattatggaggagtattacaggtccgtatatgtg
gtggggaatattggaaatccttatacagagatagcattagaaacgaaagacgatacggtt
gtagtagcagaaatcagcagttttcagttggagacaacggagaacttccgccctcaagta
tccgcgattctgaatatcactccggatcatttagacagacatcacagcatggaaaattat
gcggctgtgaaagagcggatagctgagaaccagacggataaagaggtatgtgtactcaac
tatgaaaatgagtatacgaaagcatttgccgagagatgttcggcagatgttctattcttt
tcttcggtgaggagactggggcgtggtatctatctagagggagaagatatctatctggca
ggtatcggaccggcggcaggcagcgatagaaagaaaattatgaccattcacgatatgaat
ctggtaggaatctgcaacgtggaaaatgtaatggctgccatcgctgttgcacttagtgca
gaagttccgctggcacatattttggatacgataaagcgctttcaggcagtggaacatagg
attgaattcgtcgccacgaaaagcggggtggattattataatgattctaaagggacgaat
ccggatgccgccatccacggaatccgggcgatgtcaaagcctaccgtattaattggcggg
ggatatgataagcaaagtgagtatgatgaatggattgaggcctttgacgggaaggtgaag
gccttcgtgttaataggtcagacggcagataagatagaaaattgtgccagaaggcacggt
attgagaatattttccgtgcggatagctttgaagaagctctgaagatttgtacacgagaa
gcagtatccggggatgcggtactcttatctcctgcttgtgcgagttggggaatgttccct
aattatgaggtgagagggaaggtattcaaggattatgtgaatgccttgtaa
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