Kineothrix sp. MB12-C1: RBB56_18020
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Entry
RBB56_18020 CDS
T09298
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
kib
Kineothrix sp. MB12-C1
Pathway
kib00230
Purine metabolism
kib00240
Pyrimidine metabolism
kib01100
Metabolic pathways
kib01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
kib00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RBB56_18020 (nrdD)
00240 Pyrimidine metabolism
RBB56_18020 (nrdD)
Enzymes [BR:
kib01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
RBB56_18020 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
ATP-cone
DZR
Zn_Ribbon_TF
Gly_radical
DUF1272
ChaB
Zn_ribbon_3
TackOD1
HypA
Motif
Other DBs
NCBI-ProteinID:
WMC94558
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All DBs
Position
3910732..3912909
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AA seq
725 aa
AA seq
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MDRDVVVEFDYGEAFKPPREVKVIKKDGSLEAFNVQKVVDAVGKSAYRALTKFTEEEKQH
ICKYVVDKVMGLGQDEIPIPIMHNIVEKALEDIKPIVAKSYRDYRNYKQDFVRMMDDVYK
KSQSIMYVGDKENANTDSALVSTKRSLIFNQFNKELYQKFFMTTEEIQACRDGYIYVHDM
SARRDTMNCCLFDVANVLTGGFEMGNIWYNEPKSLDVAFDVIGDIVLSAASQQYGGFTVP
EVDKILEPYAEKTYKNSLEKYQRLGISEEKAMEEANADVLREFEQGFQGWEYKFNTVASS
RGDYPFITVTAGIGTGRFAKLATICLLDVRRKGQGKKGCKKPVLFPKIVFLYDENLHGPG
KELEDVFEAGVRCSAKTMYPDWLSLTGKGYIASMYKQYNKVISPMGCRAFLSPWYERGGM
NPADDKDTPIFVGRFNIGAVSLHLPMILAKARQESRDFYEVLDYYLNLIRQLHRRTYAYL
GEMRASTNPLAYCEGGFLGGNLKLSDKIKPILKAATASFGITAFNELQELYNGKSLVEDG
QFALEVLEHINKRVMEYKQADGNLYAVYGTPAENLCGLQVKQFRAKYGIVEGVSDKEYVS
NSFHCHVTEDITPIEKQDLEYRFWELTNGGKIQYVKYPIDYNMEAIKTLIRRAMDMGFYE
GVNLSLAYCDDCGHQELEMDVCPNCGSKNLTKIDRMNGYLSYSRVHGDTRLNDAKMAEIA
ERKSM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacagggatgttgtagtggaatttgattatggcgaagcatttaagccgccaagagaa
gtaaaagtcattaaaaaagacggaagcctggaagcattcaacgtacagaaggtagtggat
gcagtaggtaaaagtgcataccgtgcattgacgaagtttacggaagaagaaaagcagcat
atttgtaaatatgtggtggataaagtaatggggttgggacaggatgaaatcccgattccg
attatgcataatatcgtggagaaggctttggaagatattaagccgatcgttgccaagagt
taccgtgattaccgcaattataagcaggatttcgtgcgcatgatggacgatgtatataag
aagagccaatccattatgtatgtgggagacaaggagaatgctaatacggatagtgctctt
gtatccactaagagaagtcttattttcaatcagttcaataaggaattgtatcagaagttc
tttatgacgacggaggagatccaggcatgccgcgatggttatatttacgtccatgatatg
tcggctcgccgtgatacgatgaattgttgtcttttcgatgtggctaatgttctgaccggc
ggcttcgagatgggaaatatatggtataacgagcctaagtctctggacgtggcgttcgat
gttattggtgatatcgtattgagcgcggccagccagcagtatggcggtttcacggtaccg
gaagtcgataagattttagaaccctatgcggagaaaacttataaaaatagcttagagaaa
tatcaaagacttggtattagtgaagaaaaggctatggaagaagcgaatgcggatgtgttg
cgcgaattcgaacaaggatttcagggatgggaatataaatttaataccgtagcgagcagc
cgtggtgattatcctttcattacggtaactgcaggtatcggtacgggacgttttgctaaa
ctggcgacaatctgtttattggatgtaagaagaaaagggcaggggaagaagggctgtaag
aagccggtactgttccctaagatcgtatttttatatgatgagaaccttcatggaccgggc
aaggaactcgaggatgtttttgaagcaggcgtaagatgttccgctaagacaatgtatcct
gattggctgagcctcaccggaaaagggtatattgccagcatgtataagcaatataataaa
gtgatttcacctatgggttgccgtgcctttttatctccttggtatgaaagggggggaatg
aatcctgcggatgataaggatactcctatattcgtaggccgtttcaatatcggtgcagta
tctttgcaccttccgatgattctcgctaaagcaaggcaggaaagtagagatttctatgag
gtattagattactatttgaatctgattcgtcagctccataggcgtacctatgcctatttg
ggagaaatgagagcctctaccaatcctctggcatattgtgaaggaggattcctcggcggt
aatttgaagctttcagataaaattaagcctattttaaaagcggcaacagcaagcttcgga
attacggcattcaatgaattgcaggaactgtacaatggaaaatcgctggtagaggatggt
caatttgctcttgaagtattagaacacatcaataagagagtgatggaatacaagcaggcg
gatggcaatctgtatgcggtatatggcacgccggcagaaaacttatgcggtctgcaggta
aagcagttccgtgcaaaatacggtattgtggaaggggtatcggataaggaatatgtttcc
aacagtttccattgccatgtgacggaagatattacgccgattgaaaagcaagatttggaa
taccgattctgggaattgaccaatggcggcaaaattcaatatgtgaaatatccgatcgat
tacaatatggaagccattaagacgttgattcgaagagccatggatatgggcttctatgaa
ggggtgaacttgtccttagcgtattgtgatgactgtggtcatcaggagctggaaatggat
gtatgccctaattgcggaagcaaaaatctgacgaagattgaccgtatgaacggttacttg
tcctattctcgtgtgcatggagatacaagacttaacgatgcgaaaatggcagaaattgcg
gaaaggaagagtatgtaa
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