KEGG   Kitasatospora sp. CMC57: KCMC57_up08300
Entry
KCMC57_up08300    CDS       T11196                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
kic  Kitasatospora sp. CMC57
Pathway
kic03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KCMC57_up08300 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kic03021]
    KCMC57_up08300 (rpoZ)
   03400 DNA repair and recombination proteins [BR:kic03400]
    KCMC57_up08300 (rpoZ)
Enzymes [BR:kic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KCMC57_up08300 (rpoZ)
Transcription machinery [BR:kic03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     KCMC57_up08300 (rpoZ)
DNA repair and recombination proteins [BR:kic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      KCMC57_up08300 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BFV55726
LinkDB
Position
complement(880389..880655)
AA seq 88 aa
MSSSMTAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVD
THVHEKPLSIALREINAGMLTAEAIDAA
NT seq 267 nt   +upstreamnt  +downstreamnt
gtgtcctcttccatgaccgcgcccgagggcatcatcaacccgccgatcgacgagctgctc
gaggccacggactcgaagtacagcctggtgatctacgccgccaagcgcgcccgtcagatc
aacgcgtactactcgcagctcggtgagggcctgctcgagtacgtcggcccgctggtcgac
acccacgtgcacgagaagccgctgtcgatcgcgctgcgcgagatcaacgcgggcatgctc
accgcggaggccatcgacgccgcctga

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