Kitasatospora sp. CMC57: KCMC57_up09620
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Entry
KCMC57_up09620 CDS
T11196
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
kic Kitasatospora sp. CMC57
Brite
KEGG Orthology (KO) [BR:
kic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kic03019
]
KCMC57_up09620
Enzymes [BR:
kic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KCMC57_up09620
Messenger RNA biogenesis [BR:
kic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KCMC57_up09620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BFV55858
LinkDB
All DBs
Position
complement(1018989..1021871)
Genome browser
AA seq
960 aa
AA seq
DB search
MNSAMPENPETFGAPSASGTEELSPAEAYAAFRRRAKEQASTLYGFQQLYDFELDEFQLE
ACRALEAGEGVLVAAPTGSGKTIVGEFAVHLALQSGRKCFYTTPIKALSNQKFGDLVKRY
GADKVGLLTGDNSVNGDAPVVVMTTEVLRNMLYAGSSALNGLGYVVMDEVHYLADRFRGA
VWEEVIIHLPESVVLASLSATVSNAEEFGDWLDTVRGGTKVIVSEHRPVPLWQHVMAGNR
MYDLFANPDRDGRPKDAPRNPAKAVNPELVRLARSEGDRGGRDDRFGRGRGRSMPNGRPN
RVWTPGRVDVIERLDAEGLLPAITFIFSRAGCEAAVQQCLTSGLRLNRDTDRALVRSIVE
ERCADIPDEDLHVLGYFEWLDGLERGIAAHHAGMLPRFKEVVEELFVKGLVKAVFATETL
ALGINMPARSVVMEKLVKWNGETHADITPGEYTQLTGRAGRRGIDIEGHAVVLWQRGLDP
EGLAGLAGTRTYPLRSSFRPSYNMAVNLVGQFGRHRSRELLETSFAQFQADRAVVGIARQ
VQKNEDGLAGYRESMTCHLGDFEEYMGLRRTLKERENELAREGTGQRRAAAIEAIEALKP
GDVIHVPTGKFAGLALVLDPGLPPVSRSPRTVRHPDYQDGPRPVVLTAERQVKRLAMIDF
PYPVTAVDRMKIPKSFNPRSPQSRRDLASALRTKAGHLEPERFRKGRAAAADDPEIARLR
AELRQHPCHGCDEREDHARWSERYHRLHRDTELLERRMRSRTHTIARTFDRVCGLLTDLG
YLSGDTVTEDGKRLGRLYGELDLLASECIREGVWAELSAPELAACASALVFESRQSDDAA
APRVPEGASKEALGRMIRIWGHLDALEEQHKINTAEGVGQREPDLGFAWVAYRWALGHNL
DQVLRDADLPAGDFVRWTKQLIDVLGQIQDAAGDDTKLRSTARKAVDALRRGIIAYSSVG
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgccatgcccgaaaacccggagaccttcggcgcccccagcgcctccggcacc
gaggagctcagccccgccgaggcgtacgcggcctttcgccgccgggccaaggagcaggcg
agcacgctctacggcttccagcagctgtacgacttcgagctggacgagttccagctggag
gcgtgccgcgccctggaggccggtgaaggcgtgctggtcgccgctccgaccggctccggc
aagaccatcgtcggcgagttcgccgtccacctggccctgcagtccggccgcaagtgcttc
tacaccacgccgatcaaggcgctctccaaccagaagttcggcgacctggtgaagcgctac
ggcgccgacaaggtcggcctgctcaccggggacaacagcgtcaacggtgacgccccggtg
gtcgtgatgaccaccgaggtgctgcgcaacatgctctacgcgggctcctccgcgctgaat
ggcctcggctacgtggtgatggacgaggtgcactacctggccgaccggttccgcggcgcg
gtctgggaagaggtgatcatccacctgccggagtcggtggtgctggcctcgctgtcggcc
accgtctccaacgccgaggagttcggcgactggctggacaccgtgcgcggcggcaccaag
gtgatcgtctccgagcaccgccccgtgccgctctggcagcacgtgatggcgggcaaccgg
atgtacgacctgttcgccaaccccgaccgggacggccgccccaaggacgcgccgcgcaac
ccggccaaggcggtcaaccccgagctggtccggctggcccgctccgagggcgaccgcggc
gggcgcgacgaccggttcggccggggccggggccgctcgatgcccaacgggcgtccgaac
cgggtctggacgcccggccgggtcgacgtgatcgagcgcctggacgccgagggcctgctg
cccgcgatcaccttcatcttcagccgggccggctgcgaggccgccgtccagcagtgcctg
acctcggggctgcggctgaaccgcgacaccgaccgcgccctggtgcgctcgatcgtcgag
gagcgctgcgccgacatcccggacgaggacctgcacgtcctcggctacttcgagtggctc
gacgggctggagcgcggcatcgccgcccaccacgccgggatgctgccccggttcaaggag
gtggtcgaggagctcttcgtgaaggggctggtcaaggccgtcttcgcgaccgagaccctg
gcgctcggcatcaacatgcccgcccgctcggtggtgatggagaagctggtcaagtggaac
ggcgagacccacgccgacatcacccccggcgagtacacccagctcaccggccgggccggg
cgacgcggcatcgacatcgagggccacgcggtggtgctctggcagcgcggtctggacccg
gagggcctggccggcctggcgggcacccgtacgtacccgctgcgctcctcgttccgcccc
tcgtacaacatggcggtcaacctggtcggccagttcgggcggcaccgctcgcgcgagctg
ctggagacctcgttcgcccagttccaggccgaccgcgcggtggtcggtatcgcccgccag
gtgcagaagaacgaggacggcctcgcgggctaccgcgagtcgatgacctgtcatctcggc
gacttcgaggagtacatgggcctccgtcggacgctcaaggagcgggagaacgagctcgcc
cgcgagggcaccggccagcgcagggccgccgcgatcgaggcgatcgaggcgctcaagccg
ggagacgtgatccacgtgccgacgggcaagttcgccgggctcgccctggtgctcgacccc
ggcctgccgccggtcagccgctcgccccggacggtccgtcacccggactaccaggacggc
ccgcgcccggtggtgctcaccgccgagcggcaggtcaagcggctcgcgatgatcgacttc
ccgtacccggtgacggcggtcgaccggatgaagatccccaagtccttcaacccccgcagc
ccgcagtcccggcgggacctggcctcggcgctgcgcaccaaggccggtcacctggagccc
gagcggttccgcaagggccgggcggccgccgccgacgacccggagatcgcccggctgcgc
gcggagctgcggcagcacccctgccacggctgcgacgagcgcgaggaccacgcccgctgg
tccgagcgctaccaccgcctgcaccgggacaccgagctgctggagcgccggatgcgctcc
cgcacccacaccatcgcccgcaccttcgaccgggtctgcggcctgctcaccgacctcggc
tacctcagcggggacaccgtcaccgaggacggcaagcgcctcggccggctgtacggcgaa
ctcgacctgctcgcttcggagtgcatccgcgagggcgtctgggccgagctcagcgcaccc
gaactcgcggcctgtgcctcggcgttggtcttcgagtcccggcagtccgacgacgcggcc
gccccccgcgtgcccgagggcgcgagcaaggaggcgctcggccggatgatccggatctgg
ggtcacctggacgccctggaggagcagcacaagatcaacacggccgagggcgtcggccag
cgcgaacccgacctcggcttcgcctgggtcgcctatcgctgggccctcggtcacaacctc
gaccaggtcctccgcgacgccgacctcccggccggcgacttcgtccgctggaccaagcag
ctgatcgacgtgctcggccagatccaggacgcggcgggcgacgacaccaagctgcggtcc
accgcacggaaggcggtggacgcgctacggcgcggcatcatcgcgtacagctcggtcggc
tga
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