Kitasatospora sp. CMC57: KCMC57_up13440
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Entry
KCMC57_up13440 CDS
T11196
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kic Kitasatospora sp. CMC57
Pathway
kic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KCMC57_up13440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kic03400
]
KCMC57_up13440
Enzymes [BR:
kic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KCMC57_up13440
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KCMC57_up13440
DNA repair and recombination proteins [BR:
kic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KCMC57_up13440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFV56240
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All DBs
Position
1442628..1443497
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVQALAERIAEACRGRTVQRVDVLSIQVLKTFDPPMTALHGQPVTSVSRHGKFLD
LLTGEGLHLVLHLARAGWIRHRAAFPDRPGGARPGRGPQALRLVLDDGSGFEVTEQGTTK
RLAAYVVTDPQLVPGIARLGLDPLSAEFTGQRLAELAAARRQRLKTFLTDQTGLAGIGNA
YSDEIMHEARLSPYALAPSLDEEQLGRLYVAVRQVLDSAVERARATTADALKAEKKAGLA
VHGRAGEPCPRCGDTVRSVNFADSSLEYCPTCQTGGRVLADRRLSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccggaagtgcaggcgctcgccgagcggatcgccgaggcgtgccggggg
cggaccgtccagcgggtggacgtgctgtcgatccaggtgctgaagaccttcgacccgccg
atgaccgcgctgcacgggcagcccgtaacctcggtgtcccggcacgggaagttcctcgac
ctgttgaccggggaggggctgcacctggtgctgcacctggcgagggccgggtggatccgg
caccgggccgccttccccgaccgtcccggcggtgcccggccggggcgggggccgcaggcg
ctgcggctggtgctggacgacggctccggcttcgaggtgaccgagcagggcaccaccaaa
cggctggccgcgtacgtggtgaccgacccccaactggtgcccggcatcgcccggttgggc
ctcgacccgctgagcgcggagttcaccgggcagcgactggccgagctggcggcggcccgg
cgccagcggctgaagaccttcctgaccgaccagaccgggctggccggcatcggcaacgcc
tactcggacgagatcatgcacgaggcccggctctccccctacgcgctggcgccctcgctg
gacgaggagcagctcggcaggctgtacgtcgccgtccggcaggtgctcgactcggcggtc
gagcgggcccgcgccaccaccgccgacgcgctcaaggccgagaagaaggcgggcctcgcg
gtgcacggccgggccggtgagccctgcccgcgctgcggggacaccgtccgctcggtgaac
ttcgccgactcctcgctggagtactgcccgacctgtcagaccggcggccgggtgctggcc
gaccgccggctgtccagactgctcaagtag
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