Kitasatospora sp. CMC57: KCMC57_up20260
Help
Entry
KCMC57_up20260 CDS
T11196
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kic Kitasatospora sp. CMC57
Pathway
kic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KCMC57_up20260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kic03400
]
KCMC57_up20260
Enzymes [BR:
kic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KCMC57_up20260
DNA repair and recombination proteins [BR:
kic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KCMC57_up20260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PhoH
PIF1
AAA_16
NPHP3_N
TraI_hel_assoc_N
UvrD-helicase
HTH_IclR
nSTAND3
DAP3
UvrD_C
AAA
AAA_28
DUF87
AAA_10
DEAD
SLFN-g3_helicase
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
BFV56922
LinkDB
All DBs
Position
complement(2245819..2247990)
Genome browser
AA seq
723 aa
AA seq
DB search
MERITYANEETGYTVARVDTGRGANDLLTVVGALLGAQPGESLRLFGRWGSHPQYGRQFM
VENYTTVLPATVQGIQRYLGSGLIKGIGPRFAERIVEAFGVDTLEVIENEPKRLIEVPGL
GPKRTKMIAAAWEEQKSIKEVMVFLQTVGVSTSLAVRIFKKYGDASIGVVKNEPYRLASD
VWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSSDQGHCYLPEERLIADGVKLLQV
DVGLVIDCLAELVAAEGVVREQVPGEGGQPVTAVYLVPFHRAEVSLSNQLLRLLTADVDR
MPGFAGVDWEAALGWLATRTGTELAPEQRESVRLALTEKVAVLTGGPGCGKSFTVKSIVT
LALAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELRPGGEAAYDRDRPLDADLVVV
DEASMLDLILANKLVKAVAPGAHLLFVGDVDQLPSVGAGEVLRDMLSAGSPVPSVRLTRI
FRQAQQSGVVTNAHRINEGLPPITDGLPDFFLFAEEDAEAAAGLTVDVVARRIPQRFGLD
ARRDVQVLAPMHRGPAGAGALNTLLQAAVTPARDGLPERRFGGRTFRVGDKVTQIRNNYE
KGRNGVFNGTVGVVTDLNVDEQRLTVRTDEDEEVPYDFDELDELAHAYAVTIHRSQGSEY
PAVVIPVTTSAWTMLQRNLLYTAVTRAKRLVVLVGSRRAIGQAVRAVSAGRRHSALDHRL
ATG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttggagcggatcacgtacgccaacgaggagacggggtacacggtcgcccgggtcgacacc
ggtcggggtgcgaacgacctgctgacggtggtcggggcgctgctgggtgcgcagcccgga
gagtcgctgcgactgttcggccgctggggctcgcacccgcagtacgggcggcagttcatg
gtggagaactacaccacggtgctgccggccacggtgcagggcatccagcgctacctcggc
tcgggcctgatcaagggcatcggcccgcgcttcgcggagcggatcgtggaggccttcggg
gtggacaccctggaggtgatcgagaacgagccgaagcgtctgatcgaggtccccgggctc
gggccgaagcgcaccaagatgatcgccgcggcctgggaggagcagaagtccatcaaggag
gtgatggtcttcctgcagacggtcggggtctccacctccctggcggtgcggatcttcaag
aagtacggcgacgcctccatcggcgtggtgaagaacgagccgtaccggctggcctccgac
gtctggggcatcggcttcctgacggcggaccggatcgcccaggccgtcggcatcccgcac
gacagcccggagcgggtcaaggcgggcctgcagtacgcgctttcgcagagcagcgaccag
gggcactgctacctcccggaggagcggctgatcgccgacggggtgaagctgctccaggtc
gacgtgggcctggtgatcgactgcctggccgagctggtggccgccgagggggtggtgcgc
gagcaggtgccgggggagggcgggcagccggtcacggcggtgtacctggtgccgttccac
cgggccgaggtctcgctgtcgaaccagctgttgcggctgctgaccgccgacgtcgaccgg
atgccgggcttcgcgggggtggactgggaggccgcgctcggctggcttgcgacgcgtacg
ggaaccgaactcgccccggagcagcgggagtcggtgaggcttgcgctgaccgagaaggtc
gcggtgctgaccggcggtccgggctgcggcaagtcgttcacggtgaagtcgatcgtcaca
ttggcgctggcgaagcgggccaaggtggtgctggcggcgccgacggggcgggcggccaag
cggctggcggagctgacgggggctgaggcgtctacggtgcaccggctgttggagctgcgg
cccggcggcgaggcggcgtacgaccgggaccggccgttggacgcggatctggtggtggtg
gacgaggcgtccatgctggatctgatcctggcgaacaagctggtgaaggcggtcgctccg
ggcgctcatctgctcttcgtaggggacgtggaccagctgccctcggtcggcgcgggcgag
gtgctgcgggacatgctgtcggccggtagtccggtcccctcggtccggctgaccaggatc
ttccggcaggcccagcagtccggtgtggtcaccaacgcacaccggatcaacgagggtctg
ccgccgatcaccgacggtctgccggacttcttcctgttcgccgaggaggacgccgaggcg
gccgccggtctgacggtggacgtggtggcccggcggatcccgcagcggttcggcctcgac
gcccgccgggacgtccaggtgctggccccgatgcaccggggcccggccggtgcgggcgcg
ctgaacacgctgctccaggcggcggtgacaccggccagggatggtctgccggagcgccgt
ttcggcggccggacgttccgggtgggggacaaggtcacccagatccgcaacaactacgag
aaggggcggaacggggtcttcaacggcacggtcggcgtggtgaccgatctcaacgtcgac
gagcagcggctgaccgtccggacggacgaggacgaggaggtgccgtacgacttcgacgag
ctggacgagctggctcatgcgtacgccgtcacgatccaccgttcgcagggcagcgagtac
ccggcggtggtgattccggtcaccacctcggcgtggacgatgctgcaacggaacctgctc
tacaccgccgtgacgagggcgaagagactggtcgtgctggtcgggtcacggagagcgatc
ggtcaggcggttcgggccgtcagtgctggtcgcaggcactccgcgctggatcatcggctc
gcaactggatga
DBGET
integrated database retrieval system
